RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TTC31Q49AM3 519 aaPredicted RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 TMEM52BQ4KMG9 183 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 SETMARQ53H47 684 aaPredicted RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 TECRLQ5HYJ1 363 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 LDLRAP1Q5SW96 308 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 ZNF549Q6P9A3 640 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 LIPIQ6XZB0 460 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 MACC1Q6ZN28 852 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 PIGWQ7Z7B1 504 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 MMAAQ8IVH4 418 aaKnown RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 PIANPQ8IYJ0 282 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 PLD6Q8N2A8 252 aaKnown RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 FSTL5Q8N475 847 aaPredicted RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 AFAP1L2Q8N4X5 818 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 GPR26Q8NDV2 337 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 ACVR1CQ8NER5 493 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 RHEBL1Q8TAI7 183 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 NXNL1Q96CM4 212 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 EID2BQ96D98 161 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 CHFRQ96EP1 664 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 UBXN10Q96LJ8 280 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 VPS35Q96QK1 796 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 SMIM14Q96QK8 99 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 MECRQ9BV79 373 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 TRPM6Q9BX84 2022 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 RSPH9Q9H1X1 276 aaPredicted RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 P2RY12Q9H244 342 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 RABEP2Q9H5N1 569 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 TFB2MQ9H5Q4 396 aaKnown RBP8.84□□□□□ -0.99
VPS50-207ENST00000458530 PRSS16Q9NQE7 514 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 IGSF5Q9NSI5 407 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 CACNA2D2Q9NY47 1150 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 SCML1Q9UN30 329 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 WASF3Q9UPY6 502 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 PIAS3Q9Y6X2 628 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 ANKRD12Q6UB98 2062 aa8.84□□□□□ -0.99
VPS50-207ENST00000458530 IGLV3-16A0A075B6K0 115 aa8.83□□□□□ -1
VPS50-207ENST00000458530 PABPN1LA6NDY0 278 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 ERICH4A6NGS2 130 aa8.83□□□□□ -1
VPS50-207ENST00000458530 GAPDHSO14556 408 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 TSPAN6O43657 245 aa8.83□□□□□ -1
VPS50-207ENST00000458530 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 DCTN3O75935 186 aa8.83□□□□□ -1
VPS50-207ENST00000458530 WISP3O95389 354 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 TOP3BO95985 862 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 FTH1P02794 183 aa8.83□□□□□ -1
VPS50-207ENST00000458530 F7P08709 466 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 TPBGLP0DKB5 382 aa8.83□□□□□ -1
VPS50-207ENST00000458530 CBSLP0DN79 551 aa8.83□□□□□ -1
VPS50-207ENST00000458530 FGF3P11487 239 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 TFEBP19484 476 aa8.83□□□□□ -1
VPS50-207ENST00000458530 MSH3P20585 1137 aa8.83□□□□□ -1
VPS50-207ENST00000458530 DGKAP23743 735 aa8.83□□□□□ -1
VPS50-207ENST00000458530 HOXA6P31267 233 aa8.83□□□□□ -1
VPS50-207ENST00000458530 CBSP35520 551 aa8.83□□□□□ -1
VPS50-207ENST00000458530 GLRBP48167 497 aa8.83□□□□□ -1
VPS50-207ENST00000458530 SLC1A6P48664 564 aa8.83□□□□□ -1
VPS50-207ENST00000458530 DNAJB13P59910 316 aa8.83□□□□□ -1
VPS50-207ENST00000458530 ZBTB16Q05516 673 aa8.83□□□□□ -1
VPS50-207ENST00000458530 MESP2Q0VG99 397 aa8.83□□□□□ -1
VPS50-207ENST00000458530 BST1Q10588 318 aa8.83□□□□□ -1
VPS50-207ENST00000458530 RALGDSQ12967 914 aa8.83□□□□□ -1
VPS50-207ENST00000458530 GAS6Q14393 721 aa8.83□□□□□ -1
VPS50-207ENST00000458530 ZNF460Q14592 562 aa8.83□□□□□ -1
VPS50-207ENST00000458530 CST6Q15828 149 aa8.83□□□□□ -1
VPS50-207ENST00000458530 CFAP157Q5JU67 520 aa8.83□□□□□ -1
VPS50-207ENST00000458530 EOGTQ5NDL2 527 aa8.83□□□□□ -1
VPS50-207ENST00000458530 CTSL3PQ5NE16 218 aa8.83□□□□□ -1
VPS50-207ENST00000458530 HENMT1Q5T8I9 393 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 OTOAQ7RTW8 1153 aa8.83□□□□□ -1
VPS50-207ENST00000458530 PIWIL4Q7Z3Z4 852 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 ADAMTSL2Q86TH1 951 aa8.83□□□□□ -1
VPS50-207ENST00000458530 PHYKPLQ8IUZ5 450 aa8.83□□□□□ -1
VPS50-207ENST00000458530 C10orf107Q8IVU9 208 aa8.83□□□□□ -1
VPS50-207ENST00000458530 WDR75Q8IWA0 830 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 HOMEZQ8IX15 550 aa8.83□□□□□ -1
VPS50-207ENST00000458530 GBP7Q8N8V2 638 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 KDF1Q8NAX2 398 aaPredicted RBP8.83□□□□□ -1
VPS50-207ENST00000458530 DDHD1Q8NEL9 900 aa8.83□□□□□ -1
VPS50-207ENST00000458530 OR2T3Q8NH03 318 aa8.83□□□□□ -1
VPS50-207ENST00000458530 STAG3L4Q8TBR4 150 aa8.83□□□□□ -1
VPS50-207ENST00000458530 INPP5DQ92835 1189 aa8.83□□□□□ -1
VPS50-207ENST00000458530 VOPP1Q96AW1 172 aa8.83□□□□□ -1
VPS50-207ENST00000458530 ARRDC3Q96B67 414 aa8.83□□□□□ -1
VPS50-207ENST00000458530 AP2M1Q96CW1 435 aa8.83□□□□□ -1
VPS50-207ENST00000458530 NUS1Q96E22 293 aa8.83□□□□□ -1
VPS50-207ENST00000458530 DTD2Q96FN9 168 aa8.83□□□□□ -1
VPS50-207ENST00000458530 BIRC8Q96P09 236 aa8.83□□□□□ -1
VPS50-207ENST00000458530 GPR21Q99679 349 aa8.83□□□□□ -1
VPS50-207ENST00000458530 C1QTNF7Q9BXJ2 289 aa8.83□□□□□ -1
VPS50-207ENST00000458530 C12orf65Q9H3J6 166 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 MTG2Q9H4K7 406 aa8.83□□□□□ -1
VPS50-207ENST00000458530 STN1Q9H668 368 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 EML4Q9HC35 981 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 HEBP1Q9NRV9 189 aa8.83□□□□□ -1
VPS50-207ENST00000458530 SPATS2LQ9NUQ6 558 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 OXSMQ9NWU1 459 aa8.83□□□□□ -1
VPS50-207ENST00000458530 NCKIPSDQ9NZQ3 722 aa8.83□□□□□ -1
VPS50-207ENST00000458530 MRPS17Q9Y2R5 130 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms