RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MARCH4Q9P2E8 410 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 FTSJ1Q9UET6 329 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 DMGDHQ9UI17 866 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 DOLKQ9UPQ8 538 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 MAD1L1Q9Y6D9 718 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 TEX264Q9Y6I9 313 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 PRSS21Q9Y6M0 314 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 RPS6KL1Q9Y6S9 549 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 FAM169AQ9Y6X4 670 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 PCM1Q15154 2024 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 EME2A4GXA9 379 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 A6NCN8 305 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ESPNB1AK53 854 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 C1QTNF9BB2RNN3 333 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 GOLGA8KD6RF30 607 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 GOLGA8TH3BQL2 631 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 NDC80O14777 642 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 OR1I1O60431 355 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 KCNJ13O60928 360 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 DKK1O94907 266 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 EML2O95834 649 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 C1QTNF9P0C862 333 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 RALBP11234 206 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ACP5P13686 325 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ACP1P24666 158 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 AKT1P31749 480 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ELK3P41970 407 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 NSG1P42857 185 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ARL4CP56559 192 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 SIM1P81133 766 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 SHC2P98077 582 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 CALCOCO2Q13137 446 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 DNAJC3Q13217 504 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 GTF2H3Q13889 308 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 HIF1AQ16665 826 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 BCL7AQ4VC05 210 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 GLE1Q53GS7 698 aaKnown RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 DNAJC21Q5F1R6 531 aaKnown RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 HP1BP3Q5SSJ5 553 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 LYPLAL1Q5VWZ2 237 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 C8orf74Q6P047 294 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 XKR5Q6UX68 686 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ZDHHC24Q6UX98 284 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 PACS1Q6VY07 963 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 DET1Q7L5Y6 550 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 LDB1Q86U70 411 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 TRAPPC5Q8IUR0 188 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 NAGSQ8N159 534 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 CLDN19Q8N6F1 224 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 BEND7Q8N7W2 519 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 GPR150Q8NGU9 434 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ZDHHC1Q8WTX9 485 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 ZNF669Q96BR6 464 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 LRRC39Q96DD0 335 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 DCUN1D1Q96GG9 259 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 TIMM29Q9BSF4 260 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 NAT9Q9BTE0 207 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 CARD6Q9BX69 1037 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 DPEP2Q9H4A9 486 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 CATSPERZQ9NTU4 200 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 IL1RAPL1Q9NZN1 696 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 TBC1D29Q9UFV1 150 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 RALYQ9UKM9 306 aaKnown RBP9.89□□□□□ -0.83
ATG4A-206ENST00000457035 KCNK6Q9Y257 313 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 USP24Q9UPU5 2620 aa9.89□□□□□ -0.83
ATG4A-206ENST00000457035 C17orf113A0A1B0GUU1 675 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 ESYT3A0FGR9 886 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 MGAT4DA6NG13 374 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 TTC4O95801 387 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 TOP3BO95985 862 aaKnown RBP9.88□□□□□ -0.83
ATG4A-206ENST00000457035 POLBP06746 335 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PGAM1P18669 254 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PAMP19021 973 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PPARGP37231 505 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PRLHRP49683 370 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 ACADVLP49748 655 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PLTPP55058 493 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 CAV1Q03135 178 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 DMPKQ09013 629 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PDIA2Q13087 525 aaKnown RBP9.88□□□□□ -0.83
ATG4A-206ENST00000457035 HLTFQ14527 1009 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATG4A-206ENST00000457035 INSCQ1MX18 579 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PLA2G4EQ3MJ16 856 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 ZNF658BQ4V348 819 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-206ENST00000457035 METRNLQ641Q3 311 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 NEPROQ6NW34 567 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 IYDQ6PHW0 289 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 WASH2PQ6VEQ5 465 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 FAM83HQ6ZRV2 1179 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-206ENST00000457035 AMZ2Q86W34 360 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 CCNJLQ8IV13 435 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 UNC5BQ8IZJ1 945 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 ARL10Q8N8L6 244 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 FBXO25Q8TCJ0 367 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PATE1Q8WXA2 126 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 GLMNQ92990 594 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms