RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 GSTM1P09488 218 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 ACRV1P26436 265 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 PDX1P52945 283 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 GSTM4Q03013 218 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 CCDC38Q502W7 563 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 TMEM71Q6P5X7 295 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 B3GNT8Q7Z7M8 397 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 SERPINA9Q86WD7 417 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 GLIS1Q8NBF1 620 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 OR2L2Q8NH16 312 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 CCDC97Q96F63 343 aaPredicted RBP22.76■■□□□ 1.23
CBX3-204ENST00000456948 LINC00615Q96LM1 132 aaPredicted RBP22.76■■□□□ 1.23
CBX3-204ENST00000456948 SLC46A1Q96NT5 459 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 AP1M1Q9BXS5 423 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 IL22Q9GZX6 179 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 ANAPC5Q9UJX4 755 aa22.76■■□□□ 1.23
CBX3-204ENST00000456948 ZNF106Q9H2Y7 1883 aaKnown RBP22.76■■□□□ 1.23
CBX3-204ENST00000456948 ANKRD11Q6UB99 2663 aaPredicted RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 CCL22O00626 93 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 HGSO14964 777 aaPredicted RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 TNFSF15O95150 251 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 KRT14P02533 472 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 ITGA2BP08514 1039 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 PSMA3P25788 255 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 PBLDP30039 288 aaPredicted RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 LIMK2P53671 638 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 DRG2P55039 364 aaKnown RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 PCBP4P57723 403 aaKnown RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 GNG11P61952 73 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 UBE2IP63279 158 aaKnown RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 PRAMEP78395 509 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 CCDC173Q0VFZ6 552 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 PCID2Q5JVF3 399 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 TSTD2Q5T7W7 516 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 NKAIN2Q5VXU1 208 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 METRNLQ641Q3 311 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 CCDC137Q6PK04 289 aaKnown RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 WDR74Q6RFH5 385 aaPredicted RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 C19orf48Q6RUI8 117 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 AFTPHQ6ULP2 937 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 CERS6Q6ZMG9 384 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 ZNF248Q8NDW4 579 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 SNIP1Q8TAD8 396 aaKnown RBP22.75■■□□□ 1.23
CBX3-204ENST00000456948 DCBLD2Q96PD2 775 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 CCM2Q9BSQ5 444 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 TCAF1Q9Y4C2 921 aa22.75■■□□□ 1.23
CBX3-204ENST00000456948 TRBV5-4A0A0C4DH59 114 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 C17orf113A0A1B0GUU1 675 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 LILRA5A6NI73 299 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 AP2A2O94973 939 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 AMD1P17707 334 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 TPSB2P20231 275 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 COILP38432 576 aaPredicted RBP22.74■■□□□ 1.23
CBX3-204ENST00000456948 NSG1P42857 185 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 MAPK9P45984 424 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 GPS1Q13098 491 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 ITIH4Q14624 930 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 TPSAB1Q15661 275 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 CYP1B1Q16678 543 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 TMEM164Q5U3C3 297 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 TMEM26Q6ZUK4 368 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 PLXDC1Q8IUK5 500 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 SLITRK4Q8IW52 837 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 OR6P1Q8NGX9 317 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 NCSTNQ92542 709 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 NUDT22Q9BRQ3 303 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 LOXL2Q9Y4K0 774 aa22.74■■□□□ 1.23
CBX3-204ENST00000456948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 CCDC78A2IDD5 438 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 PRR19A6NJB7 356 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 CASC3O15234 703 aaKnown RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 SLC35G4P0C7Q5 338 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 CSTF2P33240 577 aaKnown RBP eCLIP22.73■■□□□ 1.23
CBX3-204ENST00000456948 CA5AP35218 305 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 SLC19A1P41440 591 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 GRIA1P42261 906 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 FNTAP49354 379 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 PRLHRP49683 370 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 SESN2P58004 480 aaPredicted RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 NFE2L1Q14494 772 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 TRIP13Q15645 432 aaPredicted RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 FASTKD1Q53R41 847 aaKnown RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 AARS2Q5JTZ9 985 aaKnown RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 ARMC3Q5W041 872 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 LRRC8BQ6P9F7 803 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 KLHL35Q6PF15 583 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 ZNF761Q86XN6 746 aaPredicted RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 CFAP206Q8IYR0 622 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 COG1Q8WTW3 980 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 HDAC10Q969S8 669 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 SEMA6CQ9H3T2 930 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 SMARCAL1Q9NZC9 954 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 SCHIP1Q9P0W5 487 aaPredicted RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 ZNF624Q9P2J8 865 aaPredicted RBP22.73■■□□□ 1.23
CBX3-204ENST00000456948 LHX6Q9UPM6 363 aa22.73■■□□□ 1.23
CBX3-204ENST00000456948 KIF26BQ2KJY2 2108 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 IGLV3-16A0A075B6K0 115 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 A0A087WV48 116 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 IGHV5-10-1A0A0J9YXX1 117 aa22.72■■□□□ 1.23
CBX3-204ENST00000456948 CCDC162PA2VCL2 907 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms