RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CCDC137Q6PK04 289 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 JAMLQ86YT9 394 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 CFAP206Q8IYR0 622 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ACTRT1Q8TDG2 376 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 GRK7Q8WTQ7 553 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 HDAC10Q969S8 669 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 SLC46A1Q96NT5 459 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 VPS37BQ9H9H4 285 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 SMARCAL1Q9NZC9 954 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF624Q9P2J8 865 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ANAPC5Q9UJX4 755 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 LOXL2Q9Y4K0 774 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 MAP1BP46821 2468 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF106Q9H2Y7 1883 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 CCDC162PA2VCL2 907 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 OR52A4PA6NMU1 304 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 USP27XA6NNY8 438 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 CES2O00748 559 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 POLBP06746 335 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 MPSTP25325 297 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 PPARGP37231 505 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 EPHA4P54764 986 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 CDK16Q00536 496 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 DMPKQ09013 629 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 CCDC173Q0VFZ6 552 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 KRT33BQ14525 404 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 BCL7AQ4VC05 210 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 SNAP47Q5SQN1 464 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 LYPLAL1Q5VWZ2 237 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 TMEM71Q6P5X7 295 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 TMEM26Q6ZUK4 368 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 OR4D9Q8NGE8 314 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 OR2L2Q8NH16 312 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 NAT14Q8WUY8 206 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 HNRNPLLQ8WVV9 542 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 TBC1D10AQ9BXI6 508 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 EPB41L1Q9H4G0 881 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 POT1Q9NUX5 634 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 PISDQ9UG56 409 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 ACSL5Q9ULC5 683 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 TCAF1Q9Y4C2 921 aa17.74■□□□□ 0.43
PDLIM2-215ENST00000456545 IGHV5-10-1A0A0J9YXX1 117 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 A8MU76 341 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 F8W8V4 182 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF185O15231 689 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 TLX3O43711 291 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 DXOO77932 396 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 PRSS56P0CW18 603 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 HOXB3P14651 431 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 CSTF2P33240 577 aaKnown RBP eCLIP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 MLLT3P42568 568 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 ARSDP51689 593 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 LIMK2P53671 638 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 MAPK10P53779 464 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 PCBP4P57723 403 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 UBE2IP63279 158 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 SQSTM1Q13501 440 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 TRA2AQ13595 282 aaKnown RBP eCLIP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 CLCA4Q14CN2 919 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 FASTKD1Q53R41 847 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 METRNLQ641Q3 311 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 TTC27Q6P3X3 843 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 AFTPHQ6ULP2 937 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF574Q6ZN55 896 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 FAM83HQ6ZRV2 1179 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 TMPRSS9Q7Z410 1059 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 SLITRK4Q8IW52 837 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 RBM12BQ8IXT5 1001 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 RCBTB1Q8NDN9 531 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF248Q8NDW4 579 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 NAF1Q96HR8 494 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 CCDC74BQ96LY2 380 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 CCM2Q9BSQ5 444 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 IL22Q9GZX6 179 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 RIMKLBQ9ULI2 386 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 PYCARDQ9ULZ3 195 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 WDR37Q9Y2I8 494 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 FRYQ5TBA9 3013 aa17.73■□□□□ 0.43
PDLIM2-215ENST00000456545 TRBV5-4A0A0C4DH59 114 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 OR51F1A6NGY5 319 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 PHF2O75151 1096 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 KRT37O76014 449 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 GOT2P00505 430 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 ITGA2BP08514 1039 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 SLC35G4P0C7Q5 338 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 HGFP14210 728 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 BRAFP15056 766 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 TYRP1P17643 537 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 TPSB2P20231 275 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 EIF2S3P41091 472 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 NSG1P42857 185 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 PRLHRP49683 370 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 PPP1R7Q15435 360 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 TPSAB1Q15661 275 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 RPE65Q16518 533 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 TMEM164Q5U3C3 297 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 LRRC8BQ6P9F7 803 aa17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 WDR74Q6RFH5 385 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-215ENST00000456545 C19orf48Q6RUI8 117 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms