RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MACC1Q6ZN28 852 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GAREM2Q75VX8 874 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GOLGA7Q7Z5G4 137 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 MYO1HQ8N1T3 1032 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GALNT4Q8N4A0 578 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 ANKFN1Q8N957 763 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 OR6K2Q8NGY2 324 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 METTL6Q8TCB7 284 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 TEX37Q96LM6 180 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 HTATIP2Q9BUP3 242 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 FAM126AQ9BYI3 521 aaPredicted RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 SLC2A11Q9BYW1 496 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 COQ10BQ9H8M1 238 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 HEBP1Q9NRV9 189 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 PLK2Q9NYY3 685 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 LEF1Q9UJU2 399 aaPredicted RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 CNOT6Q9ULM6 557 aaKnown RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 SH3BP1Q9Y3L3 701 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 SNX13Q9Y5W8 968 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 PIKFYVEQ9Y2I7 2098 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 ASPDHA6ND91 283 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 AGAP14A8MT82 685 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 OR7A17O14581 309 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 CLDN7O95471 211 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 OTCP00480 354 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 CKMP06732 381 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 CCL5P13501 91 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 BPIP17213 487 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 UFM1P61960 85 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 CDKL1Q00532 357 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 EMX2Q04743 252 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GTF2H2Q13888 395 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 NFYCQ13952 458 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 PLEKHG6Q3KR16 790 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GTF2H2CQ6P1K8 395 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 PTRH1Q86Y79 214 aaKnown RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 BHMTQ93088 406 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 TMEM125Q96AQ2 219 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 LRRC3Q9BY71 257 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 LATS2Q9NRM7 1088 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 NDUFA13Q9P0J0 144 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 CFAP97Q9P2B7 532 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 SUN2Q9UH99 717 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GLYATL1P3A0A0U1RQE8 302 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 CCDC154A6NI56 674 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 HNRNPRO43390 633 aaKnown RBP14.85□□□□□ -0.03
LDLR-202ENST00000455727 SYNCRIPO60506 623 aaKnown RBP14.85□□□□□ -0.03
LDLR-202ENST00000455727 TNFAIP8O95379 198 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 MYCP01106 439 aaPredicted RBP14.85□□□□□ -0.03
LDLR-202ENST00000455727 PFKLP17858 780 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 MSH3P20585 1137 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 SERPINA4P29622 427 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 PPM1AP35813 382 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
LDLR-202ENST00000455727 CAPRIN1Q14444 709 aaKnown RBP14.85□□□□□ -0.03
LDLR-202ENST00000455727 INPP5AQ14642 412 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 GPRC6AQ5T6X5 926 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 HMBOX1Q6NT76 420 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 PRR23BQ6ZRT6 265 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 RNF165Q6ZSG1 346 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 ERMP1Q7Z2K6 904 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 TMC8Q8IU68 726 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 BBS7Q8IWZ6 715 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 FNDC5Q8NAU1 212 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 OR2AP1Q8NGE2 309 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 PROKR1Q8TCW9 393 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 CANT1Q8WVQ1 401 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 BOCQ9BWV1 1114 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 OSBPL11Q9BXB4 747 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 EPB41L1Q9H4G0 881 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 ZNF696Q9H7X3 374 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
LDLR-202ENST00000455727 C9JVG2 144 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SLC25A14O95258 325 aaPredicted RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 CAPN1P07384 714 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 CA5AP35218 305 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SPAM1P38567 509 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 VEGFBP49765 207 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 EEFSECP57772 596 aaKnown RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 CYP4F8P98187 520 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 PRKG2Q13237 762 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 DGKKQ5KSL6 1271 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 C6orf52Q5T4I8 152 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SCIMPQ6UWF3 145 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 FIBCD1Q8N539 461 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 OR4F6Q8NGB9 312 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 VPS33AQ96AX1 596 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 ISG20Q96AZ6 181 aaKnown RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 CCDC97Q96F63 343 aaPredicted RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 CDK15Q96Q40 435 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SEMA6AQ9H2E6 1030 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 GMPR2Q9P2T1 348 aaKnown RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 PPIL1Q9Y3C6 166 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 DHRS12A0PJE2 317 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 ZNF839A8K0R7 811 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 IFRD1O00458 451 aaPredicted RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 CSPG5O95196 566 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SMIM18P0DKX4 95 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 PEX19P40855 299 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms