RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MRPS18AQ9NVS2 196 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM120CQ9NX05 1096 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 HYPKQ9NX55 129 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 NTMQ9P121 344 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 KIAA1456Q9P272 454 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC23A1Q9UHI7 598 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC24A2Q9UI40 661 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC27A6Q9Y2P4 619 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 MFHAS1Q9Y4C4 1052 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A0B4J293 547 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 C5orf52A6NGY3 159 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 OTOL1A6NHN0 477 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 MAGEB17A8MXT2 336 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TLR4O00206 839 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 XPO1O14980 1071 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 DCLK1O15075 740 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SMAD9O15198 467 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 KRT86O43790 486 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 HBP1O60381 514 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TBX19O60806 448 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CBFA2T3O75081 653 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 AGFG2O95081 481 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZWINTO95229 277 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPDEFO95238 335 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 KAT7O95251 611 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CSTAP01040 98 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 PGK2P07205 417 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 FHP07954 510 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CYP4B1P13584 511 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 NCF2P19878 526 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ALDH1B1P30837 517 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 HTR7P34969 479 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLK3P49761 638 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPS6KA3P51812 740 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 EFNA5P52803 228 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SUCLG1P53597 346 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ITGA1P56199 1179 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CTSWP56202 376 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TAS2R40P59535 323 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TAS2R50P59544 299 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 NKX3-2P78367 333 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL13RA1P78552 427 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 LIPEQ05469 1076 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXCL9Q07325 125 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 DUSP8Q13202 625 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ALKBH1Q13686 389 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL13RA2Q14627 380 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 DLG2Q15700 870 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 PDK4Q16654 411 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CR1LQ2VPA4 569 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 Q5PR19 223 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 DCST1Q5T197 706 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 LIN9Q5TKA1 542 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 DBX2Q6ZNG2 339 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZBTB49Q6ZSB9 765 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 HTR3DQ70Z44 454 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 EFL1Q7Z2Z2 1120 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 NRROSQ86YC3 692 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SIAH3Q8IW03 269 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM219AQ8IW50 185 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC15A3Q8IY34 581 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SYNE4Q8N205 404 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 CPXM2Q8N436 756 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 RASGEF1AQ8N9B8 481 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 HJURPQ8NCD3 748 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR10S1Q8NGN2 331 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR8J1Q8NGP2 316 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATP8B4Q8TF62 1192 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM171Q8WVE6 324 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 UBLCP1Q8WVY7 318 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 FIG4Q92562 907 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 NPIPB3Q92617 1050 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 KAT2BQ92831 832 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 NT5C3BQ969T7 300 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 NXNL1Q96CM4 212 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 C7orf34Q96L11 122 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 PLEKHG4BQ96PX9 1271 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 SMC6Q96SB8 1091 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 PIGQQ9BRB3 760 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 MMTAG2Q9BU76 263 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 C11orf84Q9BUA3 381 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 MRI1Q9BV20 369 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM168Q9H0V1 697 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 VCX3BQ9H321 246 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 KCNK9Q9NPC2 374 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 PLK2Q9NYY3 685 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 POLLQ9UGP5 575 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 UBQLN2Q9UHD9 624 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 MRPS17Q9Y2R5 130 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 HBS1LQ9Y450 684 aaKnown RBP4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATRNL1Q5VV63 1379 aa4.38□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRAV6A0A075B6T7 132 aa4.37□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A1B0GTQ1 180 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms