RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DDHD1Q8NEL9 900 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 ZNF398Q8TD17 642 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 ALG3Q92685 438 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 RTP4Q96DX8 246 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 CTRCQ99895 268 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 APOL2Q9BQE5 337 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 SEMA4CQ9C0C4 833 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 SLC40A1Q9NP59 571 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 SMOXQ9NWM0 555 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 DNMT3AQ9Y6K1 912 aaPredicted RBP12.66□□□□□ -0.38
CHD3-206ENST00000452447 PIKFYVEQ9Y2I7 2098 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 MN1Q10571 1320 aaPredicted RBP12.66□□□□□ -0.38
CHD3-206ENST00000452447 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 POLR1CO15160 346 aaPredicted RBP12.65□□□□□ -0.38
CHD3-206ENST00000452447 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
CHD3-206ENST00000452447 RASSF9O75901 435 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 CRTAMO95727 393 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 ANKRD34CP0C6C1 535 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 CTSCP53634 463 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 GFERP55789 205 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 PTPRCAPQ14761 206 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 FNBP1LQ5T0N5 605 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 AADACL2Q6P093 401 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 LRRC57Q8N9N7 239 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 TTC13Q8NBP0 860 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 OR4K2Q8NGD2 314 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 EXTL1Q92935 676 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 ZNF514Q96K75 400 aaPredicted RBP12.65□□□□□ -0.38
CHD3-206ENST00000452447 C9orf72Q96LT7 481 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 TGM7Q96PF1 710 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 GORASP1Q9BQQ3 440 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 ASB8Q9H765 288 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.38
CHD3-206ENST00000452447 MIF4GDA9UHW6 222 aaKnown RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 TOX3O15405 576 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 RAD1O60671 282 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 SRP72O76094 671 aaKnown RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 C9P02748 559 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 ADRA1AP35348 466 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 CYP4F2P78329 520 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 FOXM1Q08050 763 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 DMPKQ09013 629 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 OLIG2Q13516 323 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 GPR18Q14330 331 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 CLCA4Q14CN2 919 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 DET1Q7L5Y6 550 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 NLGN4XQ8N0W4 816 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 NLGN4YQ8NFZ3 816 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 ZDHHC12Q96GR4 267 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 APMAPQ9HDC9 416 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 OGFRQ9NZT2 677 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 PILRAQ9UKJ1 303 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 WDR37Q9Y2I8 494 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 GAPDHSO14556 408 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 RALBP11234 206 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 LIFP15018 202 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 MAP4P27816 1152 aaKnown RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 PBLDP30039 288 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 HADHAP40939 763 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 CAPZBP47756 277 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 SEPHS1P49903 392 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 NFE2L1Q14494 772 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 IRGCQ6NXR0 463 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 KLHL35Q6PF15 583 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 ARHGEF18Q6ZSZ5 1173 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 BEND7Q8N7W2 519 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 RSC1A1Q92681 617 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 KIAA1143Q96AT1 154 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 DCUN1D1Q96GG9 259 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 TBL1YQ9BQ87 522 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 FKBPLQ9UIM3 349 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 CRLS1Q9UJA2 301 aa12.64□□□□□ -0.39
CHD3-206ENST00000452447 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
CHD3-206ENST00000452447 KLHL33A6NCF5 533 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 MGAT4DA6NG13 374 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 B8ZZF3 427 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 STK17BO94768 372 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 PLA2G2AP14555 144 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 CA5AP35218 305 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 LEPRP48357 1165 aaKnown RBP12.63□□□□□ -0.39
CHD3-206ENST00000452447 TMPRSS15P98073 1019 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 PLCL1Q15111 1095 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 LINC00303Q3SY05 128 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 CACHD1Q5VU97 1274 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 DESI2Q9BSY9 194 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 EFHD1Q9BUP0 239 aa12.63□□□□□ -0.39
CHD3-206ENST00000452447 TRIT1Q9H3H1 467 aaKnown RBP12.63□□□□□ -0.39
CHD3-206ENST00000452447 ZNF768Q9H5H4 540 aaKnown RBP12.63□□□□□ -0.39
CHD3-206ENST00000452447 GPN2Q9H9Y4 310 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms