RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KYQ8NBH2 561 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 GIMAP7Q8NHV1 300 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 HMGCLL1Q8TB92 370 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 STAG3L4Q8TBR4 150 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 CD200R1Q8TD46 325 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 ACDQ96AP0 544 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 RCN3Q96D15 328 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 RSRC1Q96IZ7 334 aaKnown RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 P2RY12Q9H244 342 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 ZDHHC4Q9NPG8 344 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 ANGPTL2Q9UKU9 493 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 POMPQ9Y244 141 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 COMMD10Q9Y6G5 202 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 MYO15AQ9UKN7 3530 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 ZNF106Q9H2Y7 1883 aaKnown RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 DMDP11532 3685 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 SCN8AQ9UQD0 1980 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 TBC1D3BA6NDS4 549 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 PRRT4C9JH25 899 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 CDC7O00311 574 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 PFDN6O15212 129 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 FKBP6O75344 327 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 VPS26AO75436 327 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 ZNF821O75541 412 aaPredicted RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 ALPIP09923 528 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 ANPEPP15144 967 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 PTGER3P43115 390 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 RPS9P46781 194 aaKnown RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 CDH13P55290 713 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 RPL26P61254 145 aaKnown RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 SH3BP2P78314 561 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 CACNG1Q06432 222 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 MTAPQ13126 283 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 PTK2BQ14289 1009 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 LRRC32Q14392 662 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 SQLEQ14534 574 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 TSNQ15631 228 aaKnown RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 PPP1R3AQ16821 1122 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 DGKKQ5KSL6 1271 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 GRIN3AQ8TCU5 1115 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 FUBP1Q96AE4 644 aaKnown RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 LMLNQ96KR4 655 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 MRGBPQ9NV56 204 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 C2orf42Q9NWW7 574 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 EVLQ9UI08 416 aaPredicted RBP10.59□□□□□ -0.71
PKP4-206ENST00000452162 PPM1HQ9ULR3 514 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 RNF112Q9ULX5 631 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 PKP3Q9Y446 797 aa10.59□□□□□ -0.71
PKP4-206ENST00000452162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 NPEPPSL1A6NEC2 478 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 SUPT3HB4E1H0 165 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 PPP6CO00743 305 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 GAPDHSO14556 408 aaPredicted RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 NVLO15381 856 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 GPR39O43194 453 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 KLK8O60259 260 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 SUPT3HO75486 399 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 ESR1P03372 595 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 FGF4P08620 206 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 GFAPP14136 432 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 HLA-FP30511 346 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 CD70P32970 193 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 ERFP50548 548 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 AP2B1P63010 937 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 ZRSR2Q15696 482 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 GEN1Q17RS7 908 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 PLEKHG6Q3KR16 790 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 LARP4Q71RC2 724 aaKnown RBP eCLIP10.58□□□□□ -0.72
PKP4-206ENST00000452162 CLYBLQ8N0X4 340 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 SIDT2Q8NBJ9 832 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 OR6K2Q8NGY2 324 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 JADE3Q92613 823 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 KCNJ9Q92806 393 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 CCDC124Q96CT7 223 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 NSUN5Q96P11 429 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 GPR63Q9BZJ6 419 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 ABCB8Q9NUT2 735 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 KIAA1522Q9P206 1035 aaPredicted RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 TRMT6Q9UJA5 497 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 INTS6Q9UL03 887 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 HCN2Q9UL51 889 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 A0A0J9YYE9 177 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 SOCS5O75159 536 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 TRBC1P01850 177 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 RPS17P08708 135 aaKnown RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 ATP6V1C1P21283 382 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 MAPK8P45983 427 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 CDKN3Q16667 212 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 C2orf27AQ580R0 203 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 TCHHL1Q5QJ38 904 aaPredicted RBP10.58□□□□□ -0.72
PKP4-206ENST00000452162 KANK2Q63ZY3 851 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 GK5Q6ZS86 529 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 ADGRG6Q86SQ4 1221 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 PGAM4Q8N0Y7 254 aa10.58□□□□□ -0.72
PKP4-206ENST00000452162 STK40Q8N2I9 435 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms