RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PPM1DO15297 605 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 EIF3HO15372 352 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 EML2O95834 649 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 UGT1A5P35504 534 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 CARSP49589 748 aaKnown RBP16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 TLE3Q04726 772 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 TRADDQ15628 312 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 ARMC3Q5W041 872 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 EMBQ6PCB8 327 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 KCNE4Q8WWG9 221 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 TMEM74Q96NL1 305 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 PHACTR1Q9C0D0 580 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 IL22Q9GZX6 179 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 SEMA6CQ9H3T2 930 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 TRABDQ9H4I3 376 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 PRORYQ9H606 182 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 BPIFA1Q9NP55 256 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 KCNK6Q9Y257 313 aa16.82■□□□□ 0.28
PRPF40A-204ENST00000450303 SCN8AQ9UQD0 1980 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 MAGEB16A2A368 324 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 SDR42E2A6NKP2 422 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 TMX2-CTNND1H3BSU7 103 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 PLD2O14939 933 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 KLK10O43240 276 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 CRTAMO95727 393 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 ACP5P13686 325 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 GRIA1P42261 906 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 CHRNA4P43681 627 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 SESN2P58004 480 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 PDE1BQ01064 536 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 OLIG2Q13516 323 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 SOWAHCQ53LP3 525 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 PHF19Q5T6S3 580 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 NKAIN2Q5VXU1 208 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 DENND5AQ6IQ26 1287 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 IGF2-ASQ6U949 168 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 ZDHHC24Q6UX98 284 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 CAND1Q86VP6 1230 aaKnown RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 ZNF761Q86XN6 746 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 PPHLN1Q8NEY8 458 aaKnown RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 LRRC39Q96DD0 335 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 FCRL3Q96P31 734 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 BBC3Q96PG8 261 aaPredicted RBP16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 OR2AG1Q9H205 316 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 MED4Q9NPJ6 270 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 ZDHHC18Q9NUE0 388 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 WDR70Q9NW82 654 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 SAMD15Q9P1V8 674 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 VPS18Q9P253 973 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 ATXN10Q9UBB4 475 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 PISDQ9UG56 409 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 NFU1Q9UMS0 254 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 PTPRQQ9UMZ3 2332 aa16.81■□□□□ 0.28
PRPF40A-204ENST00000450303 CDRT15L2A8MXV6 281 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 SNX2O60749 519 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 SASH3O75995 380 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 SLC25A14O95258 325 aaPredicted RBP16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 ZNF8P17098 575 aaPredicted RBP16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 BPIP17213 487 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 TPH1P17752 444 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 ITIH1P19827 911 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 ADRA1DP25100 572 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 CCKBRP32239 447 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 CXADRP78310 365 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 ZFP36L1Q07352 338 aaKnown RBP16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 PEX6Q13608 980 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 BBS9Q3SYG4 887 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 PCID2Q5JVF3 399 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 CASC4Q6P4E1 433 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 ZNF438Q7Z4V0 828 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 PIM3Q86V86 326 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 BRSK1Q8TDC3 778 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 BLOC1S5Q8TDH9 187 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 NUDT22Q9BRQ3 303 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 NAT9Q9BTE0 207 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 CPNE5Q9HCH3 593 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 LOXL2Q9Y4K0 774 aa16.8■□□□□ 0.28
PRPF40A-204ENST00000450303 IGSF10Q6WRI0 2623 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 HEATR9A2RTY3 570 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 C2orf81A6NN90 581 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 TP73O15350 636 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 GRID2O43424 1007 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 MTX2O75431 263 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 CPNE6O95741 557 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 JMJD7P0C870 316 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 MGAT1P26572 445 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 CD1CP29017 333 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 OAS2P29728 719 aaKnown RBP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 PPM1FP49593 454 aaPredicted RBP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 PDIA2Q13087 525 aaKnown RBP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 LRP8Q14114 963 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 SLMAPQ14BN4 828 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 TAF1AQ15573 450 aaPredicted RBP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 ZNF574Q6ZN55 896 aaPredicted RBP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 ZNF534Q76KX8 674 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 NLRP9Q7RTR0 991 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 GLT6D1Q7Z4J2 308 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 ADGRG6Q86SQ4 1221 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 CCDC25Q86WR0 208 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 SLITRK4Q8IW52 837 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms