RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SLC12A9Q9BXP2 914 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 KLHL3Q9UH77 587 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 PILRAQ9UKJ1 303 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 AMFRQ9UKV5 643 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 R3HDM2Q9Y2K5 976 aaKnown RBP12.13□□□□□ -0.47
MSH5-209ENST00000450148 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 DNMT3AQ9Y6K1 912 aaPredicted RBP12.13□□□□□ -0.47
MSH5-209ENST00000450148 CAPN6Q9Y6Q1 641 aa12.13□□□□□ -0.47
MSH5-209ENST00000450148 TCRBV7S2A1N4TA0A589 114 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 C5orf60A6NFR6 353 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 LDB2O43679 373 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 RAD1O60671 282 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 SRP72O76094 671 aaKnown RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 UBXN7O94888 489 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 PRAMEF1O95521 474 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 FTCDO95954 541 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TYRP1P17643 537 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TNNT3P45378 269 aaPredicted RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 LEPRP48357 1165 aaKnown RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 GDF10P55107 478 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 NFE2L1Q14494 772 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 SPARCL1Q14515 664 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 PEX26Q7Z412 305 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 KIAA1328Q86T90 577 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 AMZ2Q86W34 360 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 PLXDC1Q8IUK5 500 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TRIM48Q8IWZ4 208 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 BEND7Q8N7W2 519 aaPredicted RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 SLC35B2Q8TB61 432 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 MED8Q96G25 268 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 HES6Q96HZ4 224 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TTC25Q96NG3 672 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TEFMQ96QE5 360 aaKnown RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 CTRCQ99895 268 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 ASPSCR1Q9BZE9 553 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 RAB33BQ9H082 229 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 ZMYND15Q9H091 742 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 EPHA6Q9UF33 1036 aa12.12□□□□□ -0.47
MSH5-209ENST00000450148 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
MSH5-209ENST00000450148 C2orf81A6NN90 581 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 METTL18O95568 372 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 DLGAP3O95886 979 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 LIFP15018 202 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 VCLP18206 1134 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 CETN2P41208 172 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 CAPZBP47756 277 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 PPM1FP49593 454 aaPredicted RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 CYP4F2P78329 520 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 KIF5AQ12840 1032 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 RPE65Q16518 533 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 METRNLQ641Q3 311 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 CEACAM20Q6UY09 585 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 EXTL1Q92935 676 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 CXorf40BQ96DE9 158 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 LINC00615Q96LM1 132 aaPredicted RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 TBL1YQ9BQ87 522 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 ZCCHC2Q9C0B9 1178 aaKnown RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 ZNF768Q9H5H4 540 aaKnown RBP12.11□□□□□ -0.47
MSH5-209ENST00000450148 ASB8Q9H765 288 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 SEMA5BQ9P283 1151 aa12.11□□□□□ -0.47
MSH5-209ENST00000450148 TRBV5-4A0A0C4DH59 114 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 MGAT4DA6NG13 374 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 CCL22O00626 93 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 TOX3O15405 576 aaPredicted RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 ITGB2P05107 769 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 PLA2G2AP14555 144 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 AMD1P17707 334 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 PPP1CAP62136 330 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 SH3BP2P78314 561 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 TBR1Q16650 682 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 LONRF2Q1L5Z9 754 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 PARP6Q2NL67 630 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 ZNF658BQ4V348 819 aaPredicted RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 FNBP1LQ5T0N5 605 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 DET1Q7L5Y6 550 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 PRSS42Q7Z5A4 293 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 CACNA2D3Q8IZS8 1091 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 SYCE1Q8N0S2 351 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 LILRA3Q8N6C8 439 aaPredicted RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 IL22RA1Q8N6P7 574 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 UBL4BQ8N7F7 174 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 FAM71DQ8N9W8 422 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 SPC24Q8NBT2 197 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms