RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GSTM4Q03013 218 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 PTK2BQ14289 1009 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 ZNF460Q14592 562 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 ZNF658BQ4V348 819 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-203ENST00000449049 UGT3A1Q6NUS8 523 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 C11orf96Q7Z7L8 435 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 LRRTM4Q86VH4 590 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 EXOC3L1Q86VI1 746 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 TRAPPC5Q8IUR0 188 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 SRRM1Q8IYB3 904 aaKnown RBP13.84□□□□□ -0.19
SHMT2-203ENST00000449049 BEND7Q8N7W2 519 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-203ENST00000449049 GIMAP7Q8NHV1 300 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 CCM2Q9BSQ5 444 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 FGF22Q9HCT0 170 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 MED4Q9NPJ6 270 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 SPATS2LQ9NUQ6 558 aaKnown RBP13.84□□□□□ -0.19
SHMT2-203ENST00000449049 NOVA2Q9UNW9 492 aaKnown RBP13.84□□□□□ -0.19
SHMT2-203ENST00000449049 DHRS7Q9Y394 339 aa13.84□□□□□ -0.19
SHMT2-203ENST00000449049 THADAQ6YHU6 1953 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 SPTY2D1-AS1A0A0U1RR47 76 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 PRSS38A1L453 326 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 GRID2O43424 1007 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 MAGEC1O60732 1142 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 C2P06681 752 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 ITGB6P18564 788 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 ITPKAP23677 461 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 AOAHP28039 575 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 DHPSP49366 369 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-203ENST00000449049 PDAP1Q13442 181 aaKnown RBP13.83□□□□□ -0.2
SHMT2-203ENST00000449049 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 ENPP7Q6UWV6 458 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 CEP68Q76N32 757 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 OXR1Q8N573 874 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 SIDT2Q8NBJ9 832 aaKnown RBP13.83□□□□□ -0.2
SHMT2-203ENST00000449049 FAM136AQ96C01 138 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 CABS1Q96KC9 395 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 SLC30A3Q99726 388 aa13.83□□□□□ -0.2
SHMT2-203ENST00000449049 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
SHMT2-203ENST00000449049 DNMT3AQ9Y6K1 912 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-203ENST00000449049 A0A087X1B8 175 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 A0A096LPK6 155 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 HMGB1P1B2RPK0 211 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 KMOO15229 486 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 BCAT2O15382 392 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PYGBP11216 843 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 ZNF37AP17032 561 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 KRT4P19013 534 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 CCR7P32248 378 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 SLC18A2Q05940 514 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 GPS2Q13227 327 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PYCR3Q53H96 274 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 TAF1BQ53T94 588 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PPM1JQ5JR12 505 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PEAR1Q5VY43 1037 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 CRTC3Q6UUV7 619 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 TMEM207Q6UWW9 146 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 OR1E3Q8WZA6 343 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 GPAMQ9HCL2 828 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 MRPL40Q9NQ50 206 aaKnown RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 GULP1Q9UBP9 304 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 KLQ9UEF7 1012 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 NCOR1O75376 2440 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 C17orf113A0A1B0GUU1 675 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 KPNA5O15131 536 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 MAGOHP61326 146 aaKnown RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 FZD2Q14332 565 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 GBX1Q14549 363 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PAQR3Q6TCH7 311 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 CLEC14AQ86T13 490 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 ZBTB2Q8N680 514 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 OR2L2Q8NH16 312 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 ELMO1Q92556 727 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 INPP5DQ92835 1189 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PDXPQ96GD0 296 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 SYTL2Q9HCH5 934 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 SSU72Q9NP77 194 aaKnown RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 SARS2Q9NP81 518 aaKnown RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PILRBQ9UKJ0 227 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 PNMA8BQ9ULN7 279 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-203ENST00000449049 ANKRD6Q9Y2G4 727 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 DGKBQ9Y6T7 804 aa13.82□□□□□ -0.2
SHMT2-203ENST00000449049 KLHL33A6NCF5 533 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 GOLGA8RI6L899 631 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 TLR4O00206 839 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 VILLO15195 856 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 POP7O75817 140 aaKnown RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SLC34A2O95436 690 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 CREB1P16220 341 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SLC26A3P40879 764 aa13.81□□□□□ -0.2
SHMT2-203ENST00000449049 AFF3P51826 1226 aaKnown RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SRP54P61011 504 aaKnown RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 EIF2B5Q13144 721 aaKnown RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-203ENST00000449049 ALG11Q2TAA5 492 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms