RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MAMLD1Q13495 774 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 AP5B1Q2VPB7 878 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 FUT11Q495W5 492 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TOR1AIP1Q5JTV8 583 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF585AQ6P3V2 769 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 POMZP3Q6PJE2 187 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RHBDF2Q6PJF5 856 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 USP30Q70CQ3 517 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 METTL27Q8N6F8 245 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZC3HAV1LQ96H79 300 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC6A18Q96N87 628 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RNF157Q96PX1 679 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TWNKQ96RR1 684 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZSWIM1Q9BR11 485 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC6A16Q9GZN6 736 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DMAC2Q9NW81 257 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 HMGXB4Q9UGU5 601 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SNX8Q9Y5X2 465 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 AKAP6Q13023 2319 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZBTB42B2RXF5 422 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 MT-CO3P00414 261 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 CDH2P19022 906 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 FBLP22087 321 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCNCP24863 283 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 LY6DQ14210 128 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRKD1Q15139 912 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PDCD2Q16342 344 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC39A4Q6P5W5 647 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF574Q6ZN55 896 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM110Q86TL2 294 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 XYLT1Q86Y38 959 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.57□□□□□ -1.522e-6■■■■■ 54.4
CDC42BPA-209ENST00000448940 DACT3Q96B18 629 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 FMO2Q99518 471 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZPBPQ9BS86 351 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF780BQ9Y6R6 833 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 DOCK6Q96HP0 2047 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 A0A0A0MRY4 1105 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM8BA6NDV4 472 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PRAMEF1O95521 474 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 KRT6AP02538 564 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 KRT6BP04259 564 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 C6P13671 934 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 FMO4P31512 558 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PTPN7P35236 360 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 CD151P48509 253 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 KRT6CP48668 564 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 PTPRNQ16849 979 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 HLA-BQ31612 363 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ALFQ53S48 1182 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC38Q5VT99 294 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 NEPROQ6NW34 567 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 C16orf62Q7Z3J2 963 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 IQCKQ8N0W5 287 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPATA13Q96N96 652 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 RABEP2Q9H5N1 569 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMLHEQ9NVH6 421 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 GTF2A1LQ9UNN4 478 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 COQ4Q9Y3A0 265 aa5.57□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKRD31Q8N7Z5 1873 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 E7EQ34 232 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNK5O95279 499 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ALDOAP04075 364 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PROZP22891 400 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SERPINB9P50453 376 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 COPZ1P61923 177 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SCAPQ12770 1279 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 MTM1Q13496 603 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF470Q6ECI4 717 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PPIL6Q8IXY8 311 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR4E2Q8NGC2 313 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 TEKT5Q96M29 485 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CTRCQ99895 268 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 HERPUD2Q9BSE4 406 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CAPS2Q9BXY5 557 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 B4GALT6Q9UBX8 382 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PACSIN2Q9UNF0 486 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ISPDA4D126 451 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 PLD2O14939 933 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 NTRK1P04629 796 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADRB3P13945 408 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 HOXD12P35452 270 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 RPL26P61254 145 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 USP46P62068 366 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 DMPKQ09013 629 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 HYAL2Q12891 473 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 LACTB2Q53H82 288 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 IKBIPQ70UQ0 350 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF571Q7Z3V5 609 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF761Q86XN6 746 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCDC116Q8IYX3 515 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF563Q8TA94 476 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 JOSD2Q8TAC2 188 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 THAP3Q8WTV1 239 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 RIT1Q92963 219 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 KREMEN1Q96MU8 473 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC25A51Q9H1U9 297 aa5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 RPL26L1Q9UNX3 145 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-209ENST00000448940 CACNA1DQ01668 2161 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms