RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PRELID2Q8N945 189 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 NCSTNQ92542 709 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 TMEM159Q96B96 161 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 ULK4Q96C45 1275 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 DCUN1D1Q96GG9 259 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 CRELD1Q96HD1 420 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 DPYSL5Q9BPU6 564 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 CASS4Q9NQ75 786 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 PDP2Q9P2J9 529 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 PISDQ9UG56 409 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 BPTFQ12830 3046 aa12.51□□□□□ -0.41
PRPF40A-203ENST00000448428 ZZEF1O43149 2961 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 TRBV5-4A0A0C4DH59 114 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 MGAT4DA6NG13 374 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 ZSCAN12O43309 604 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 DUX1O43812 170 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 GAS8O95995 478 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 THRAP10827 490 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 CCL4P13236 92 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 PBLDP30039 288 aaPredicted RBP12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 MAPK9P45984 424 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 ARSDP51689 593 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 EPHA4P54764 986 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 BCL7AQ4VC05 210 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 WDR74Q6RFH5 385 aaPredicted RBP12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 XKR5Q6UX68 686 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 TAS2R42Q7RTR8 314 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 SERPINA9Q86WD7 417 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 TRIM48Q8IWZ4 208 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 SPACA3Q8IXA5 215 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 SLC35F6Q8N357 371 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 RASGEF1CQ8N431 466 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 PBKQ96KB5 322 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 COPS8Q99627 209 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 HOMER3Q9NSC5 361 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 TRMT1Q9NXH9 659 aaKnown RBP12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 ZDHHC3Q9NYG2 299 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
PRPF40A-203ENST00000448428 IGLV3-16A0A075B6K0 115 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 CCDC162PA2VCL2 907 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 OR51F1A6NGY5 319 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 LILRA5A6NI73 299 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 A8MU76 341 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 HGSO14964 777 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 NVLO15381 856 aaKnown RBP12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 RALBP11234 206 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 FGF3P11487 239 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 ATP1B2P14415 290 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 ACRV1P26436 265 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 HALP42357 657 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 ABCG1P45844 678 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 MAPK10P53779 464 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 TLE3Q04726 772 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 CACNG1Q06432 222 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 RPE65Q16518 533 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 SNAP47Q5SQN1 464 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 ARHGAP22Q7Z5H3 698 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 PIANPQ8IYJ0 282 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 CFAP206Q8IYR0 622 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 OR2L2Q8NH16 312 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 KCNE4Q8WWG9 221 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 USP7Q93009 1102 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 CXorf40BQ96DE9 158 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 LINC00615Q96LM1 132 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 ZNF778Q96MU6 729 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 DPH1Q9BZG8 443 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 POT1Q9NUX5 634 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 AKAP7Q9P0M2 348 aaPredicted RBP12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 FAM8A1Q9UBU6 413 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 SLC2A6Q9UGQ3 507 aa12.49□□□□□ -0.41
PRPF40A-203ENST00000448428 HEATR9A2RTY3 570 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 KLHL33A6NCF5 533 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 CFAP99D6REC4 459 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 KLK10O43240 276 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 PRAMEF10O60809 474 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 UBXN7O94888 489 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 POLBP06746 335 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 TYRP1P17643 537 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 ADRA1DP25100 572 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 MSNP26038 577 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 PRLHRP49683 370 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 BASP1P80723 227 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 GPR18Q14330 331 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 TSTD2Q5T7W7 516 aa12.48□□□□□ -0.41
PRPF40A-203ENST00000448428 PDZD3Q86UT5 571 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms