RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLC19A1P41440 591 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 MAPK9P45984 424 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 GPR3P46089 330 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 FNTAP49354 379 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 INHBCP55103 352 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 CFHR1Q03591 330 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 DMPKQ09013 629 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 KIR2DS5Q14953 304 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 BCL7AQ4VC05 210 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 PCID2Q5JVF3 399 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 CES3Q6UWW8 571 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 PROSER1Q86XN7 944 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 CREG2Q8IUH2 290 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 TRIM48Q8IWZ4 208 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 CLDN19Q8N6F1 224 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 TBC1D10AQ9BXI6 508 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 RAXQ9Y2V3 346 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 PRSS21Q9Y6M0 314 aa14.56□□□□□ -0.08
HDAC4-204ENST00000446876 MGAT4DA6NG13 374 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 OR5K4A6NMS3 321 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 CFAP99D6REC4 459 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 GOLGA8MH3BSY2 632 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 TLX3O43711 291 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 CPNE6O95741 557 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 HGFP14210 728 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 MAGEA6P43360 314 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 PRLHRP49683 370 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 ACVR1Q04771 509 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 ZFP36L1Q07352 338 aaKnown RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 LAMB3Q13751 1172 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 SEMA3AQ14563 771 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 PHF19Q5T6S3 580 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 AGAP9Q5VTM2 703 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 DUS1LQ6P1R4 473 aaKnown RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 LRRC8BQ6P9F7 803 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 AFTPHQ6ULP2 937 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 ABRAXAS1Q6UWZ7 409 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 ZNF574Q6ZN55 896 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 SLITRK4Q8IW52 837 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 KLHL7Q8IXQ5 586 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 MPP5Q8N3R9 675 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 GPR150Q8NGU9 434 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 OR6P1Q8NGX9 317 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 ZNF514Q96K75 400 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 TRIM56Q9BRZ2 755 aaKnown RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 WWP1Q9H0M0 922 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 STN1Q9H668 368 aaKnown RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 POLR1BQ9H9Y6 1135 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 BFARQ9NZS9 450 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 DKK4Q9UBT3 224 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 RIMKLBQ9ULI2 386 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 CFAP20Q9Y6A4 193 aaKnown RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 SAR1BQ9Y6B6 198 aa14.55□□□□□ -0.08
HDAC4-204ENST00000446876 DNMT3AQ9Y6K1 912 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-204ENST00000446876 CCDC187A0A096LP49 1063 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 SRRM3A6NNA2 597 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 OR1I1O60431 355 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 VIPP01282 170 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 POLBP06746 335 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 XRCC1P18887 633 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 CCKBRP32239 447 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 NPY2RP49146 381 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 PRAMEP78395 509 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 CDK16Q00536 496 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 PPP1R7Q15435 360 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 WASH2PQ6VEQ5 465 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 NLRP9Q7RTR0 991 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 LDB1Q86U70 411 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 PIM3Q86V86 326 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 CAND1Q86VP6 1230 aaKnown RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 RCBTB1Q8NDN9 531 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 OR2L2Q8NH16 312 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 OR4L1Q8NH43 312 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 GRK7Q8WTQ7 553 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 HEXDCQ8WVB3 486 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 JPH3Q8WXH2 748 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 CXorf40BQ96DE9 158 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 LIN37Q96GY3 246 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 PRR11Q96HE9 360 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 AHCYL2Q96HN2 611 aaKnown RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 LINC00615Q96LM1 132 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 CCDC74BQ96LY2 380 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 TMEM74Q96NL1 305 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 IL22Q9GZX6 179 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 WASH6PQ9NQA3 447 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 TREX1Q9NSU2 369 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 MARCH4Q9P2E8 410 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-204ENST00000446876 ACACAQ13085 2346 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 EPG5Q9HCE0 2579 aa14.54□□□□□ -0.08
HDAC4-204ENST00000446876 IGHV5-10-1A0A0J9YXX1 117 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 DUX1O43812 170 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 KCNJ13O60928 360 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 HALP42357 657 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 PTGIRP43119 386 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 LSSP48449 732 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 GPR18Q14330 331 aa14.53□□□□□ -0.08
HDAC4-204ENST00000446876 C16orf72Q14CZ0 275 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms