RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CLCNKBP51801 687 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GRB7Q14451 532 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 PGM5Q15124 567 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 B3GNT9Q6UX72 402 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 BPIFB1Q8TDL5 484 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ASB15Q8WXK1 588 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ELOVL6Q9H5J4 265 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 OLA1Q9NTK5 396 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 RNF146Q9NTX7 359 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CASZ1Q86V15 1759 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 CITO14578 2027 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 GADD45AP24522 165 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 IFITM3Q01628 133 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 FAM187BQ17R55 369 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZC3H12BQ5HYM0 836 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 TMEM125Q96AQ2 219 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 MLPHQ9BV36 600 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 ZBTB24O43167 697 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 PRKAR1AP10644 381 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 RPS5P46782 204 aaKnown RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 STAT5BP51692 787 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AP2S1P53680 142 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.615e-6■■■□□ 19.1
HERC1-201ENST00000443617 LCN1P1Q5VSP4 162 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 DET1Q7L5Y6 550 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 AFG1LQ8WV93 481 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 RIPOR3Q96MK2 946 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 SLC30A3Q99726 388 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 RANGRFQ9HD47 186 aaPredicted RBP4.97□□□□□ -1.61
HERC1-201ENST00000443617 RASSF1Q9NS23 344 aa4.97□□□□□ -1.61
HERC1-201ENST00000443617 ACKR2O00590 384 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 PIP5K1BO14986 540 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 CYBBP04839 570 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 RPS27LQ71UM5 84 aaKnown RBP4.96□□□□□ -1.61
HERC1-201ENST00000443617 SPATC1Q76KD6 591 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 ZNF598Q86UK7 904 aaKnown RBP4.96□□□□□ -1.61
HERC1-201ENST00000443617 GPSM1Q86YR5 675 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 PELI3Q8N2H9 469 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 RPL3LQ92901 407 aaKnown RBP4.96□□□□□ -1.61
HERC1-201ENST00000443617 FRMD6Q96NE9 622 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 XYLT2Q9H1B5 865 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 MED28Q9H204 178 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 KCNE2Q9Y6J6 123 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 ZNF487B1APH4 448 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 KLHL12Q53G59 568 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 TRIM48Q8IWZ4 208 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 OR52K2Q8NGK3 314 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 TMEM209Q96SK2 561 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 C12orf10Q9HB07 376 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 PCDHGA8Q9Y5G5 932 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 LYVE1Q9Y5Y7 322 aa4.96□□□□□ -1.61
HERC1-201ENST00000443617 ENDOD1O94919 500 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 BMP1P13497 986 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CAPN3P20807 821 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 GTF2E2P29084 291 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 MAPK12P53778 367 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TAS2R39P59534 338 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 FOXD4Q12950 439 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 HECTD2Q5U5R9 776 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 LYPD8Q6UX82 237 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 DENND6AQ8IWF6 608 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 C2CD4AQ8NCU7 369 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 PEX13Q92968 403 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 FAM198AQ9UFP1 575 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NUFIP1Q9UHK0 495 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 SLCO3A1Q9UIG8 710 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 DNAJB2P25686 324 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 C19orf57Q0VDD7 668 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 OR56A4Q8NGH8 313 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 AKAP1Q92667 903 aaKnown RBP eCLIP4.96□□□□□ -1.62
HERC1-201ENST00000443617 FAM120BQ96EK7 910 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 LRCH3Q96II8 777 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 METTL2AQ96IZ6 378 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 B3GNT5Q9BYG0 378 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TMEM45AQ9NWC5 275 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 GLTPQ9NZD2 209 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SIX4Q9UIU6 781 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NALCNQ8IZF0 1738 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 LZTS3O60299 673 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 ZNF484Q5JVG2 852 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TWIST2Q8WVJ9 160 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 DNAJA4Q8WW22 397 aaPredicted RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 SLC7A5P2Q9GIP4 190 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 NTN4Q9HB63 628 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 FBRSL1Q9HCM7 1045 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 ITGAMP11215 1152 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CYP2B6P20813 491 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 IDH2P48735 452 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 BLVRAP53004 296 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 MAB21L1Q13394 359 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TMEM135Q86UB9 458 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RIOX2Q8IUF8 465 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 ZFAND1Q8TCF1 268 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 TRNT1Q96Q11 434 aaKnown RBP4.96□□□□□ -1.62
HERC1-201ENST00000443617 MRIQ9BWK5 157 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 COL20A1Q9P218 1284 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 HMGXB4Q9UGU5 601 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 RPS6KA6Q9UK32 745 aa4.96□□□□□ -1.62
HERC1-201ENST00000443617 CPSF3Q9UKF6 684 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms