RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PCMTD2Q9NV79 361 aa13.62□□□□□ -0.23
LINC00642-202ENST00000442515 CSAG2Q9Y5P2 127 aa13.62□□□□□ -0.23
LINC00642-202ENST00000442515 PCNX1Q96RV3 2341 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 OR5K3A6NET4 321 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 DIAPH2O60879 1101 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 MTX2O75431 263 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 IPO13O94829 963 aaKnown RBP13.61□□□□□ -0.23
LINC00642-202ENST00000442515 ZBTB11O95625 1053 aaPredicted RBP13.61□□□□□ -0.23
LINC00642-202ENST00000442515 SNRPB2P08579 225 aaKnown RBP13.61□□□□□ -0.23
LINC00642-202ENST00000442515 STSP08842 583 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 IDSP22304 550 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 MIPP30301 263 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 DSC2Q02487 901 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 ART3Q13508 389 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 PLCL1Q15111 1095 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 TESK1Q15569 626 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 PTCHD3Q3KNS1 767 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 ANKRD20A8PQ5CZ79 823 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 DCAF10Q5QP82 559 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 ALS2CLQ60I27 953 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 SPOCD1Q6ZMY3 1216 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 TEX26Q8N6G2 289 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 CCHCR1Q8TD31 782 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 GRHL3Q8TE85 626 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 CLIP3Q96DZ5 547 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 FER1L6-AS2Q96M78 137 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 TLR10Q9BXR5 811 aa13.61□□□□□ -0.23
LINC00642-202ENST00000442515 NOVA2Q9UNW9 492 aaKnown RBP13.61□□□□□ -0.23
LINC00642-202ENST00000442515 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
LINC00642-202ENST00000442515 A0A1B0GUH1 482 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 H3BRJ5 948 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 DDX3YO15523 660 aaKnown RBP13.6□□□□□ -0.23
LINC00642-202ENST00000442515 LCA5LO95447 670 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 AMPD1P23109 780 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 HALP42357 657 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 SYCP1Q15431 976 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 TMTC4Q5T4D3 741 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 ALG1LQ6GMV1 187 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 PSTKQ8IV42 348 aaKnown RBP13.6□□□□□ -0.23
LINC00642-202ENST00000442515 MCOLN2Q8IZK6 566 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 NXPE1Q8N323 547 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 GLYATL1Q969I3 302 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 TRAPPC9Q96Q05 1148 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 WDR77Q9BQA1 342 aaPredicted RBP13.6□□□□□ -0.23
LINC00642-202ENST00000442515 TRIM8Q9BZR9 551 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 SOHLH2Q9NX45 425 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 BTRCQ9Y297 605 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 PADI2Q9Y2J8 665 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 TTLL3Q9Y4R7 772 aa13.6□□□□□ -0.23
LINC00642-202ENST00000442515 C9J4A7 227 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 MASP2O00187 686 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-202ENST00000442515 KLHL41O60662 606 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 RPL26P61254 145 aaKnown RBP13.59□□□□□ -0.23
LINC00642-202ENST00000442515 MAMLD1Q13495 774 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 DPYSL2Q16555 572 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 QPCTQ16769 361 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
LINC00642-202ENST00000442515 ZNF789Q5FWF6 425 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 FBXO38Q6PIJ6 1188 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 SPNS3Q6ZMD2 512 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 C11orf96Q7Z7L8 435 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 ITLN2Q8WWU7 325 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-202ENST00000442515 EID2BQ96D98 161 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 PPM1MQ96MI6 270 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 IP6K3Q96PC2 410 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 CSPG4P5Q96PW8 444 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 NUP85Q9BW27 656 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 ACTR5Q9H9F9 607 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-202ENST00000442515 FANCEQ9HB96 536 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 PCDH9Q9HC56 1237 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 HRASLS2Q9NWW9 162 aa13.59□□□□□ -0.23
LINC00642-202ENST00000442515 RPL26L1Q9UNX3 145 aaKnown RBP13.59□□□□□ -0.23
LINC00642-202ENST00000442515 ZNF469Q96JG9 3925 aaPredicted RBP13.58□□□□□ -0.23
LINC00642-202ENST00000442515 VEGFDO43915 354 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 KLF7O75840 302 aaPredicted RBP13.58□□□□□ -0.24
LINC00642-202ENST00000442515 CDK14O94921 469 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 COX6B1P14854 86 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 VCLP18206 1134 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 CA4P22748 312 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 SERPINB6P35237 376 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 ARL4AP40617 200 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 TSFMP43897 325 aaKnown RBP13.58□□□□□ -0.24
LINC00642-202ENST00000442515 DCDC1P59894 354 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 RPE65Q16518 533 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 POLNQ7Z5Q5 900 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 OOSP2Q86WS3 158 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 TRAPPC5Q8IUR0 188 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 TRAM1L1Q8N609 369 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 GPR26Q8NDV2 337 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 OR1L3Q8NH93 324 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 ARRDC2Q8TBH0 407 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 PPP4R1Q8TF05 950 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 DHRS4Q9BTZ2 278 aa13.58□□□□□ -0.24
LINC00642-202ENST00000442515 TRIM7Q9C029 511 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms