RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MINDY4Q4G0A6 757 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LIN9Q5TKA1 542 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM164Q5U3C3 297 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LRRC8EQ6NSJ5 796 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 AADACL2Q6P093 401 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 C5orf46Q6UWT4 87 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DYMQ7RTS9 669 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KBTBD6Q86V97 674 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TSPYL5Q86VY4 417 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 IFNEQ86WN2 208 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PLCZ1Q86YW0 608 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KRT78Q8N1N4 520 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MPP5Q8N3R9 675 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TAB3Q8N5C8 712 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 PRELID2Q8N945 189 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KYQ8NBH2 561 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GLB1L3Q8NCI6 653 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 OR2T3Q8NH03 318 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC35G2Q8TBE7 412 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CPT1BQ92523 772 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BAP1Q92560 729 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BIRC7Q96CA5 298 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZHX1-C8orf76Q96EF9 292 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM169Q96HH4 297 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 AHCYL2Q96HN2 611 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 CNDP2Q96KP4 475 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 MFSD14AQ96MC6 490 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TWNKQ96RR1 684 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 POP1Q99575 1024 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 FAM118BQ9BPY3 351 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ADI1Q9BV57 179 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KIFC1Q9BW19 673 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ROGDIQ9GZN7 287 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KLHL31Q9H511 634 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ACAD9Q9H845 621 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KANSL2Q9H9L4 492 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NANOGQ9H9S0 305 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RSAD1Q9HA92 442 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BIN3Q9NQY0 253 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NDUFAF4Q9P032 175 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC17A7Q9P2U7 560 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ADAM30Q9UKF2 790 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ITGA11Q9UKX5 1188 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PNMA8BQ9ULN7 279 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 RNF11Q9Y3C5 154 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC22A7Q9Y694 548 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MRPL42Q9Y6G3 142 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 U3KQV3 271 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 MYH15Q9Y2K3 1946 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CIB4A0PJX0 185 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CCDC78A2IDD5 438 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 A6NCN8 305 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SYNDIG1LA6NDD5 238 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC15A5A6NIM6 579 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LEUTXA8MZ59 168 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PIK3R2O00459 728 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GPAA1O43292 621 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 HTRA2O43464 458 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 NDUFA2O43678 99 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZNF780AO75290 641 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 UPK1BO75841 260 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GJB5O95377 273 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 AMHP03971 560 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DLDP09622 509 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 RD3LP0DJH9 198 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BMP4P12644 408 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NR2C1P13056 603 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TGM2P21980 687 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RPS3P23396 243 aaKnown RBP eCLIP2.75□□□□□ -1.97
LIG4-203ENST00000442234 ADSSP30520 456 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RAP1GAPP47736 663 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 HOXA1P49639 335 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 SULT1E1P49888 294 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TOB1P50616 345 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 AFF1P51825 1210 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 AP1S2P56377 157 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 C21orf58P58505 322 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RPL10AP62906 217 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 NHLH1Q02575 133 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BST1Q10588 318 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GRIK2Q13002 908 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CCINQ13939 588 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZNF181Q2M3W8 571 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 USP41Q3LFD5 358 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM236Q5W0B7 351 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLFN12LQ6IEE8 588 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM81Q6P7N7 255 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CYP2R1Q6VVX0 501 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TRIM72Q6ZMU5 477 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RNF111Q6ZNA4 994 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RTL10Q7L3V2 364 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TRIM48Q8IWZ4 208 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RGL4Q8IZJ4 473 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PHTF2Q8N3S3 785 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DNAAF3Q8N9W5 541 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 OR52N1Q8NH53 320 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LRRN4Q8WUT4 740 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 POF1BQ8WVV4 589 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PCNPQ8WW12 178 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms