RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SLC46A1Q96NT5 459 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 RANBP9Q96S59 729 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 ZDHHC3Q9NYG2 299 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 PYCARDQ9ULZ3 195 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 SNX12Q9UMY4 172 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 WDR37Q9Y2I8 494 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 ADRA1DP25100 572 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 ACRV1P26436 265 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 RBMS1P29558 406 aaKnown RBP23.21■■□□□ 1.31
VARS-217ENST00000440048 CACNG1Q06432 222 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 EIF3IQ13347 325 aaKnown RBP23.21■■□□□ 1.31
VARS-217ENST00000440048 NFE2L1Q14494 772 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 TRIP13Q15645 432 aaPredicted RBP23.21■■□□□ 1.31
VARS-217ENST00000440048 CYP1B1Q16678 543 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 TSTD2Q5T7W7 516 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 TAS2R42Q7RTR8 314 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 TRIM48Q8IWZ4 208 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 PIANPQ8IYJ0 282 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 FBXO39Q8N4B4 442 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 OR13J1Q8NGT2 312 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 OR10G6Q8NH81 332 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 SNIP1Q8TAD8 396 aaKnown RBP23.21■■□□□ 1.31
VARS-217ENST00000440048 ACTRT1Q8TDG2 376 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 AHCYL2Q96HN2 611 aaKnown RBP23.21■■□□□ 1.31
VARS-217ENST00000440048 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.21■■□□□ 1.31
VARS-217ENST00000440048 SLC2A6Q9UGQ3 507 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 CACNA1GO43497 2377 aa23.21■■□□□ 1.31
VARS-217ENST00000440048 IGLV3-16A0A075B6K0 115 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 IGHV5-10-1A0A0J9YXX1 117 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 CCDC162PA2VCL2 907 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 MGAT4DA6NG13 374 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 OR52A4PA6NMU1 304 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 CFAP99D6REC4 459 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 PLD2O14939 933 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 VIPP01282 170 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 ATP1B2P14415 290 aaPredicted RBP23.2■■□□□ 1.3
VARS-217ENST00000440048 PPM1FP49593 454 aaPredicted RBP23.2■■□□□ 1.3
VARS-217ENST00000440048 ERVPABLB-1P60509 514 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 CLCA4Q14CN2 919 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 ZNF778Q96MU6 729 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 DPYSL5Q9BPU6 564 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 TBC1D10AQ9BXI6 508 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 RIMKLBQ9ULI2 386 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 LHX6Q9UPM6 363 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 TCAF1Q9Y4C2 921 aa23.2■■□□□ 1.3
VARS-217ENST00000440048 A0A087WV48 116 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 OR51F1A6NGY5 319 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 AGRPO00253 132 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 CES2O00748 559 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 ZNF185O15231 689 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 DUX1O43812 170 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 TNFSF15O95150 251 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 KRT14P02533 472 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 HGFP14210 728 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 COILP38432 576 aaPredicted RBP23.19■■□□□ 1.3
VARS-217ENST00000440048 EIF2S3P41091 472 aaKnown RBP23.19■■□□□ 1.3
VARS-217ENST00000440048 PRLHRP49683 370 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 VPS41P49754 854 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 LIMK2P53671 638 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 EPHA4P54764 986 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 SESN2P58004 480 aaPredicted RBP23.19■■□□□ 1.3
VARS-217ENST00000440048 C16orf72Q14CZ0 275 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 METRNLQ641Q3 311 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 OR4D9Q8NGE8 314 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 OR2L2Q8NH16 312 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 HDAC10Q969S8 669 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 LINC00615Q96LM1 132 aaPredicted RBP23.19■■□□□ 1.3
VARS-217ENST00000440048 CCDC74BQ96LY2 380 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 DCBLD2Q96PD2 775 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 UCK1Q9HA47 277 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 THSD1Q9NS62 852 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 TMEM9Q9P0T7 183 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 PSMD13Q9UNM6 376 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 LOXL2Q9Y4K0 774 aa23.19■■□□□ 1.3
VARS-217ENST00000440048 PRAMEF33A0A0G2JMD5 474 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 TCRBV7S3A2A0A539 114 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 KLHL33A6NCF5 533 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 LILRA5A6NI73 299 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 TPSB2P20231 275 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 MPSTP25325 297 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 FOXN2P32314 431 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 HALP42357 657 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 MLLT3P42568 568 aaPredicted RBP23.18■■□□□ 1.3
VARS-217ENST00000440048 MAPK9P45984 424 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 ACVR1Q04771 509 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 GPS1Q13098 491 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 GSE1Q14687 1217 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 TPSAB1Q15661 275 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 DBN1Q16643 649 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 TMEM71Q6P5X7 295 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 XKR5Q6UX68 686 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 TMEM26Q6ZUK4 368 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 NLRP9Q7RTR0 991 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 PPHLN1Q8NEY8 458 aaKnown RBP23.18■■□□□ 1.3
VARS-217ENST00000440048 TMEM159Q96B96 161 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 CXorf40BQ96DE9 158 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 ZMYND15Q9H091 742 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 POT1Q9NUX5 634 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 FAM8A1Q9UBU6 413 aa23.18■■□□□ 1.3
VARS-217ENST00000440048 IGSF10Q6WRI0 2623 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms