RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SLC30A1Q9Y6M5 507 aa17.42■□□□□ 0.38
CCDC188-201ENST00000439765 BAHCC1Q9P281 2608 aa17.42■□□□□ 0.38
CCDC188-201ENST00000439765 OR51F1A6NGY5 319 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 OPA1O60313 960 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 SNX2O60749 519 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 EML2O95834 649 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 MT-CO3P00414 261 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 MSH3P20585 1137 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 MCM3P25205 808 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 ECHS1P30084 290 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 CDKN1CP49918 316 aaPredicted RBP17.41■□□□□ 0.38
CCDC188-201ENST00000439765 CTSCP53634 463 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 VSNL1P62760 191 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 LRRC8BQ6P9F7 803 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 SNX20Q7Z614 316 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 PDZD3Q86UT5 571 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 NXPE1Q8N323 547 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 PPHLN1Q8NEY8 458 aaKnown RBP17.41■□□□□ 0.38
CCDC188-201ENST00000439765 OR13J1Q8NGT2 312 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 HNRNPLLQ8WVV9 542 aaKnown RBP17.41■□□□□ 0.38
CCDC188-201ENST00000439765 CDKN2AIPNLQ96HQ2 116 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 ZNF778Q96MU6 729 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 C19orf43Q9BQ61 176 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 ABCG4Q9H172 646 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 KLC4Q9NSK0 619 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 TBC1D29Q9UFV1 150 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 SLC23A2Q9UGH3 650 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 SLC2A6Q9UGQ3 507 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 RAB21Q9UL25 225 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 NFU1Q9UMS0 254 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 TCAF1Q9Y4C2 921 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 RNF215Q9Y6U7 377 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 LOC400499M0QZD8 3231 aa17.41■□□□□ 0.38
CCDC188-201ENST00000439765 H7C0S8 307 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 KMOO15229 486 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 MLNP12872 115 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 PBLDP30039 288 aaPredicted RBP17.4■□□□□ 0.38
CCDC188-201ENST00000439765 SEPT7Q16181 437 aaKnown RBP17.4■□□□□ 0.38
CCDC188-201ENST00000439765 SKIDA1Q1XH10 827 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 FNBP1LQ5T0N5 605 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 TSTD2Q5T7W7 516 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 OGFOD3Q6PK18 319 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 CAND1Q86VP6 1230 aaKnown RBP17.4■□□□□ 0.38
CCDC188-201ENST00000439765 SNIP1Q8TAD8 396 aaKnown RBP17.4■□□□□ 0.38
CCDC188-201ENST00000439765 ULK4Q96C45 1275 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 SERPINB12Q96P63 405 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 RANBP9Q96S59 729 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 XAB2Q9HCS7 855 aaKnown RBP17.4■□□□□ 0.38
CCDC188-201ENST00000439765 AK5Q9Y6K8 562 aa17.4■□□□□ 0.38
CCDC188-201ENST00000439765 AP3B1O00203 1094 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 TLX3O43711 291 aaPredicted RBP17.39■□□□□ 0.37
CCDC188-201ENST00000439765 GLB1P16278 677 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 ZNF7P17097 686 aaPredicted RBP17.39■□□□□ 0.37
CCDC188-201ENST00000439765 ADRA1DP25100 572 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 MGAT1P26572 445 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 BIRC2Q13490 618 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 TAS2R42Q7RTR8 314 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 C11orf96Q7Z7L8 435 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 BEND7Q8N7W2 519 aaPredicted RBP17.39■□□□□ 0.37
CCDC188-201ENST00000439765 SLC37A2Q8TED4 501 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 PWWP2AQ96N64 755 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 TIMM29Q9BSF4 260 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 FOXP3Q9BZS1 431 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 IL22Q9GZX6 179 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 SYBUQ9NX95 663 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 LRIT1Q9P2V4 623 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 MTRF1LQ9UGC7 380 aaKnown RBP17.39■□□□□ 0.37
CCDC188-201ENST00000439765 AHCTF1Q8WYP5 2266 aa17.39■□□□□ 0.37
CCDC188-201ENST00000439765 TRBV23OR9-2A0A075B6M9 112 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 CCDC162PA2VCL2 907 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 AGAP14A8MT82 685 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 AVILO75366 819 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 MYBL2P10244 700 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 ACRV1P26436 265 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 EIF2S3P41091 472 aaKnown RBP17.38■□□□□ 0.37
CCDC188-201ENST00000439765 MAGEA3P43357 314 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 B4GALNT1Q00973 533 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 CACNG1Q06432 222 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 CBLBQ13191 982 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 LAMB3Q13751 1172 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 CCNJLQ8IV13 435 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 PIANPQ8IYJ0 282 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 ARL14Q8N4G2 192 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 Q8N9G6 341 aaPredicted RBP17.38■□□□□ 0.37
CCDC188-201ENST00000439765 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC188-201ENST00000439765 HDAC10Q969S8 669 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 SGF29Q96ES7 293 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 DCUN1D1Q96GG9 259 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 DEPDC7Q96QD5 511 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 FMO2Q99518 471 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 COPS8Q99627 209 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 PRDM8Q9NQV8 689 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 CHRAC1Q9NRG0 131 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 BFARQ9NZS9 450 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 FAM8A1Q9UBU6 413 aa17.38■□□□□ 0.37
CCDC188-201ENST00000439765 NUDT21O43809 227 aaKnown RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 BRINP1O60477 761 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 RPLP0P05388 317 aaKnown RBP17.37■□□□□ 0.37
CCDC188-201ENST00000439765 RALBP11234 206 aa17.37■□□□□ 0.37
CCDC188-201ENST00000439765 F3P13726 295 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms