RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 NPIPB15A6NHN6 443 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 C16orf96A6NNT2 1141 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SYCE1LA8MT33 242 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TMEM114B3SHH9 223 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PRRT4C9JH25 899 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 E5RI56 91 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 C1QTNF3-AMACRE9PGA6 284 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ANHXE9PGG2 379 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 H0Y858 1186 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PSMD11O00231 422 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 EIF3FO00303 357 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 QSOX1O00391 747 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 KPNA3O00505 521 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CCL22O00626 93 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PRMT5O14744 637 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 KPNA5O15131 536 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRIM24O15164 1050 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PHGDHO43175 533 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SNX3O60493 162 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 MAGEC1O60732 1142 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRIM13O60858 407 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 EDF1O60869 148 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 RNASEH1O60930 286 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SMIM24O75264 130 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SNNO75324 88 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TBX10O75333 385 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 LEFTY1O75610 366 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 DCTN3O75935 186 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 RHOBTB1O94844 696 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 KIAA0754O94854 1291 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TIAF1O95411 115 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CLDN7O95471 211 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PRAMEF1O95521 474 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC4A1P02730 911 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PRKCGP05129 697 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ALPIP09923 528 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CCDC166P0CW27 439 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 RALBP11234 206 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PKMP14618 531 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 HNRNPLP14866 589 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 GLULP15104 373 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 BPIP17213 487 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 BGNP21810 368 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ATP5F1P24539 256 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ACRV1P26436 265 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 FMO4P31512 558 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 GKP32189 559 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 LTBRP36941 435 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 OPRD1P41143 372 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 NSG1P42857 185 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ABCG1P45844 678 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC1A6P48664 564 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SPINT3P49223 89 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 HK2P52789 917 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CDKN2DP55273 166 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 DCDC1P59894 354 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 DNAJB13P59910 316 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 IL2P60568 153 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ATP6V0D1P61421 351 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 RPS26P62854 115 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 XIAPP98170 497 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 BST1Q10588 318 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 NFATC2Q13469 925 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PEX6Q13608 980 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF234Q14588 700 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 INPP5AQ14642 412 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PTPRCAPQ14761 206 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CHI3L2Q15782 390 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SMAD1Q15797 465 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF789Q5FWF6 425 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 WIPI1Q5MNZ9 446 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 C9orf64Q5T6V5 341 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 LRRC66Q68CR7 880 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PTRHD1Q6GMV3 140 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SDE2Q6IQ49 451 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 LRRC8EQ6NSJ5 796 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF549Q6P9A3 640 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 FBXL19Q6PCT2 694 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 LRFN4Q6PJG9 635 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PARM1Q6UWI2 310 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CDHR3Q6ZTQ4 885 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 FAM47EQ6ZV65 393 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF765Q7L2R6 523 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 OTOAQ7RTW8 1153 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRMT11Q7Z4G4 463 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 YTHDF3Q7Z739 585 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TTC7BQ86TV6 843 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SERPINA9Q86WD7 417 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 C12orf40Q86WS4 652 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 RALGPS2Q86X27 583 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CRLF3Q8IUI8 442 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 SLC22A9Q8IVM8 553 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 C10orf107Q8IVU9 208 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CEP97Q8IW35 865 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PIANPQ8IYJ0 282 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CENPLQ8N0S6 344 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 PLD6Q8N2A8 252 aaKnown RBP3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 NXPE1Q8N323 547 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRAM1L1Q8N609 369 aa3.93□□□□□ -1.78
HMGB1P37-201ENST00000439613 CHST14Q8NCH0 376 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms