RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 WDR74Q6RFH5 385 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 CERS6Q6ZMG9 384 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 DET1Q7L5Y6 550 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 C11orf96Q7Z7L8 435 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 SERPINA9Q86WD7 417 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 JAMLQ86YT9 394 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 PLXDC1Q8IUK5 500 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 SLITRK4Q8IW52 837 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 CFAP206Q8IYR0 622 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 OR2L2Q8NH16 312 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 GRK7Q8WTQ7 553 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 HNRNPLLQ8WVV9 542 aaKnown RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ZFPM2Q8WW38 1151 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 CCM2Q9BSQ5 444 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 SEMA6CQ9H3T2 930 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 FAM96AQ9H5X1 160 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 PIH1D1Q9NWS0 290 aaKnown RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF624Q9P2J8 865 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 PISDQ9UG56 409 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ACACBO00763 2458 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 IGHV5-10-1A0A0J9YXX1 117 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 MROH6A6NGR9 719 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 CDRT15L2A8MXV6 281 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PGRMC1O00264 195 aaKnown RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 CASC3O15234 703 aaKnown RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 GPR39O43194 453 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 AP2A2O94973 939 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 KRT14P02533 472 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PSMA3P25788 255 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 ACRV1P26436 265 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 NSG1P42857 185 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PDX1P52945 283 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 MAPK10P53779 464 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 DRG2P55039 364 aaKnown RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 UBE2IP63279 158 aaKnown RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 NFE2L1Q14494 772 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 KRT33BQ14525 404 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 CLCA4Q14CN2 919 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 FASTKD1Q53R41 847 aaKnown RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 NKAIN2Q5VXU1 208 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 METRNLQ641Q3 311 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC137Q6PK04 289 aaKnown RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 AFTPHQ6ULP2 937 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PRUNE1Q86TP1 453 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF761Q86XN6 746 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PRELID2Q8N945 189 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 AGBL5Q8NDL9 886 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 OR6P1Q8NGX9 317 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 ACTRT1Q8TDG2 376 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 KCNE4Q8WWG9 221 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PRR11Q96HE9 360 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PDLIM2Q96JY6 352 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 OSBPL9Q96SU4 736 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 NUDT22Q9BRQ3 303 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 TBC1D10AQ9BXI6 508 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 DPH1Q9BZG8 443 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 B3GNT4Q9C0J1 378 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 IL22Q9GZX6 179 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 ASCL3Q9NQ33 180 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 SMARCAL1Q9NZC9 954 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 TCAF1Q9Y4C2 921 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PCDHB11Q9Y5F2 797 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 PCDHGA7Q9Y5G6 932 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 HEBP2Q9Y5Z4 205 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 COLEC10Q9Y6Z7 277 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 KIF26BQ2KJY2 2108 aa10.27□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF106Q9H2Y7 1883 aaKnown RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 TRBV5-4A0A0C4DH59 114 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC78A2IDD5 438 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 IFRD1O00458 451 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CCL22O00626 93 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 PFDN6O15212 129 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 NVLO15381 856 aaKnown RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 KRT37O76014 449 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 UBXN7O94888 489 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 POLBP06746 335 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 SLC35G4P0C7Q5 338 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 OR56A5P0C7T3 313 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 THRAP10827 490 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 HOXB3P14651 431 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 BRAFP15056 766 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 TPSB2P20231 275 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CD82P27701 267 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 NDUFS1P28331 727 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CA5AP35218 305 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 COILP38432 576 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 PRLHRP49683 370 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 UCNP55089 124 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 SESN2P58004 480 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC173Q0VFZ6 552 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 TPSAB1Q15661 275 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 RPE65Q16518 533 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 AARS2Q5JTZ9 985 aaKnown RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 SNAP47Q5SQN1 464 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 ARMC3Q5W041 872 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 LRRC8BQ6P9F7 803 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 C19orf48Q6RUI8 117 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF574Q6ZN55 896 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CLEC14AQ86T13 490 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms