RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PDLIM2Q96JY6 352 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 CASS4Q9NQ75 786 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZDHHC3Q9NYG2 299 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 TRBV5-4A0A0C4DH59 114 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 MGAT4DA6NG13 374 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 AP3B1O00203 1094 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 BRAFP15056 766 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 PSMA3P25788 255 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 CSF2RBP32927 897 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 SLC19A1P41440 591 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 ABCG1P45844 678 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 KCNJ1P48048 391 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 BASP1P80723 227 aaKnown RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 CACNG1Q06432 222 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 WDR74Q6RFH5 385 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZNF574Q6ZN55 896 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 TMEM26Q6ZUK4 368 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 NLRP9Q7RTR0 991 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 SLC35F6Q8N357 371 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 BEND7Q8N7W2 519 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 OR2L2Q8NH16 312 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 HNRNPLLQ8WVV9 542 aaKnown RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 CCDC97Q96F63 343 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 LINC00615Q96LM1 132 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 CCDC74BQ96LY2 380 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 RANBP9Q96S59 729 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 FAM96AQ9H5X1 160 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZNF624Q9P2J8 865 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 PISDQ9UG56 409 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 RIMKLBQ9ULI2 386 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 TTC7AQ9ULT0 858 aaPredicted RBP24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 PCDHGA7Q9Y5G6 932 aa24.28■■□□□ 1.48
RAPGEF1-206ENST00000438647 PMS2P1A4D2B8 440 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 THRAP10827 490 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 ATP1B2P14415 290 aaPredicted RBP24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 HOXB3P14651 431 aaPredicted RBP24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 ADRA1DP25100 572 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 ACRV1P26436 265 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 PBLDP30039 288 aaPredicted RBP24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 NFE2L1Q14494 772 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 CCDC38Q502W7 563 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 TAS2R42Q7RTR8 314 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 VPS37BQ9H9H4 285 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 TRMT1Q9NXH9 659 aaKnown RBP24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 ACSL5Q9ULC5 683 aa24.27■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZFHX4Q86UP3 3567 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 IGLV3-16A0A075B6K0 115 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 OR52A4PA6NMU1 304 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 PGRMC1O00264 195 aaKnown RBP24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 HGFP14210 728 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 GRIA1P42261 906 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 MAPK9P45984 424 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 PRLHRP49683 370 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 CFHR1Q03591 330 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 CCDC173Q0VFZ6 552 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 C16orf72Q14CZ0 275 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 METRNLQ641Q3 311 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 SERPINA9Q86WD7 417 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 NCSTNQ92542 709 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 PEX13Q92968 403 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 TBC1D10AQ9BXI6 508 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 PDP2Q9P2J9 529 aa24.26■■□□□ 1.47
RAPGEF1-206ENST00000438647 CSTF2P33240 577 aaKnown RBP eCLIP24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 CDK16Q00536 496 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 CLCA4Q14CN2 919 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 TSTD2Q5T7W7 516 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 C19orf48Q6RUI8 117 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 FAM83HQ6ZRV2 1179 aaPredicted RBP24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 JAMLQ86YT9 394 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 AGBL5Q8NDL9 886 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 RCBTB1Q8NDN9 531 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 PPHLN1Q8NEY8 458 aaKnown RBP24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 KCNE4Q8WWG9 221 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 MAGOHBQ96A72 148 aaKnown RBP24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 MS4A14Q96JA4 679 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 OSBPL9Q96SU4 736 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 TTC1Q99614 292 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 DPH1Q9BZG8 443 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 SLC40A1Q9NP59 571 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 WDR37Q9Y2I8 494 aa24.25■■□□□ 1.47
RAPGEF1-206ENST00000438647 CCDC78A2IDD5 438 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 NVLO15381 856 aaKnown RBP24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 SGTAO43765 313 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 ARSDP51689 593 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 COL28A1Q2UY09 1125 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 TMEM164Q5U3C3 297 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 PLXDC1Q8IUK5 500 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 HM13Q8TCT9 377 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 TMEM9Q9P0T7 183 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 PSMD13Q9UNM6 376 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 LHX6Q9UPM6 363 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 TCAF1Q9Y4C2 921 aa24.24■■□□□ 1.47
RAPGEF1-206ENST00000438647 C17orf113A0A1B0GUU1 675 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 QSOX1O00391 747 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 CES2O00748 559 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 UBXN7O94888 489 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 GSTM1P09488 218 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 AMD1P17707 334 aa24.23■■□□□ 1.47
RAPGEF1-206ENST00000438647 ITIH1P19827 911 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms