RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PAG1Q9NWQ8 432 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 TAB2Q9NYJ8 693 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 MORF4L1Q9UBU8 362 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 PPIEQ9UNP9 301 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZCWPW2A0A1B0GU75 182 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 hCG_1809904A0A1W2PP81 198 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 A0A1W2PPE2 198 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 A0A1W2PR64 198 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 A0A1W2PR77 199 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 IFITM10A6NMD0 228 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 PLPP2O43688 288 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 LDB3O75112 727 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 F7P08709 466 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 HRH2P25021 359 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 MMP14P50281 582 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 SUOXP51687 545 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 FUT6P51993 359 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 TERF1P54274 439 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 ISL1P61371 349 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 UBXN2AP68543 259 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 PITX1P78337 314 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 COG7P83436 770 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 SPOCK1Q08629 439 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 ILF3Q12906 894 aaKnown RBP eCLIP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 DLG2Q15700 870 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 MEP1AQ16819 746 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF672Q499Z4 452 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 Q75L30 129 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 KRT74Q7RTS7 529 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 ATG9AQ7Z3C6 839 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMPRSS12Q86WS5 348 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 SPATA20Q8TB22 786 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 LRRC59Q96AG4 307 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 PHF21AQ96BD5 680 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 CNDP2Q96KP4 475 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 CEP295NLQ96MC4 621 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 SMC6Q96SB8 1091 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 PKP4Q99569 1192 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 KIFC3Q9BVG8 833 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 LRMDAQ9H2I8 198 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 OSGEPL1Q9H4B0 414 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 TCP11L1Q9NUJ3 509 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 ABCF3Q9NUQ8 709 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 PSD3Q9NYI0 1048 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 RCC2Q9P258 522 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 DNAJB4Q9UDY4 337 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 CFDP1Q9UEE9 299 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 KCNG2Q9UJ96 466 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 RALYQ9UKM9 306 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 PLAGL1Q9UM63 463 aa3.54□□□□□ -1.84
TRAPPC13-204ENST00000438419 GLOD5A6NK44 160 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 C15orf62A8K5M9 175 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ADAMDEC1O15204 470 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 EIF3DO15371 548 aaKnown RBP eCLIP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 PAPSS1O43252 624 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZBTB43O43298 467 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 DKC1O60832 514 aaKnown RBP eCLIP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF217O75362 1048 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 AVILO75366 819 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 APOA4P06727 396 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 AMD1P17707 334 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 NR2F2P24468 414 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 AHRP35869 848 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF132P52740 706 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 PNLIPRP2P54317 469 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 MLLT10P55197 1068 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMF1P82094 1093 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 AIMP1Q12904 312 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 GAGE2BQ13066 116 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF718Q3SXZ3 478 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ACCSLQ4AC99 568 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 GAGE2EQ4V326 116 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ARMC3Q5W041 872 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 OR7E24Q6IFN5 339 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 GAGE2AQ6NT46 116 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 RPUSD3Q6P087 351 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 FOXL2NBQ6ZUU3 175 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 C1orf52Q8N6N3 182 aaKnown RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 MAB21L3Q8N8X9 362 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 SYT2Q8N9I0 419 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZBTB8BQ8NAP8 495 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 MCUQ8NE86 351 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 RDM1Q8NG50 284 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 CD101Q93033 1021 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 DDOQ99489 341 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 GFI1Q99684 422 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 BAG1Q99933 345 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 LRRC1Q9BTT6 524 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 LRRC4Q9HBW1 653 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC35C2Q9NQQ7 365 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 WSB2Q9NYS7 404 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 AMACRQ9UHK6 382 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF711Q9Y462 761 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 CNTNAP2Q9UHC6 1331 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 NOTCH4Q99466 2003 aa3.53□□□□□ -1.84
TRAPPC13-204ENST00000438419 LOC100509620A0A075B734 347 aa3.53□□□□□ -1.85
TRAPPC13-204ENST00000438419 LNP1A1A4G5 178 aa3.53□□□□□ -1.85
TRAPPC13-204ENST00000438419 A6NL46 340 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms