RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CYP17A1P05093 508 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 CISD3P0C7P0 127 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 CBSLP0DN79 551 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 CBSP35520 551 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 ATP13A5Q4VNC0 1218 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 CHRDL2Q6WN34 429 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 BNC2Q6ZN30 1099 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-216ENST00000437340 SYVN1Q86TM6 617 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 HPS6Q86YV9 775 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 HCAR2Q8TDS4 363 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 KCNA7Q96RP8 456 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 SLC25A23Q9BV35 468 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 TUBB1Q9H4B7 451 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 ATP6AP2A0A1C7CYW4 349 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 EIF3FO00303 357 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-216ENST00000437340 TRIM24O15164 1050 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 FFAR2O15552 330 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 ATP6AP2O75787 350 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 ADH1CP00326 375 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 ADH5P11766 374 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 DGKGP49619 791 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 SEMG2Q02383 582 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 AGKQ53H12 422 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 GK5Q6ZS86 529 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 GPRIN3Q6ZVF9 776 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 DDIASQ8IXT1 998 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 CHCHD4Q8N4Q1 142 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 C12orf76Q8N812 135 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-216ENST00000437340 KCNV2Q8TDN2 545 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 MRPL38Q96DV4 380 aaKnown RBP25.33■■□□□ 1.65
CPNE1-216ENST00000437340 LRRC3BQ96PB8 259 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 TACO1Q9BSH4 297 aaKnown RBP25.33■■□□□ 1.65
CPNE1-216ENST00000437340 PRO3102Q9H379 93 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 WDR41Q9HAD4 459 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 SLC27A6Q9Y2P4 619 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 LRRC42Q9Y546 428 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 A0A1B0GTL3 188 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 TTC34A8MYJ7 566 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 LBPP18428 481 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 ITGB6P18564 788 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 VIPR1P32241 457 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 VHLP40337 213 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 KCNC3Q14003 757 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 RBBP7Q16576 425 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 EML3Q32P44 896 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 FBXO48Q5FWF7 155 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 CYB5D2Q8WUJ1 264 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 RAD18Q9NS91 495 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 KCTD5Q9NXV2 234 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 EIF2B4Q9UI10 523 aaKnown RBP25.33■■□□□ 1.65
CPNE1-216ENST00000437340 ZNF225Q9UK10 706 aa25.33■■□□□ 1.65
CPNE1-216ENST00000437340 LEFTY1O75610 366 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 SNRPB2P08579 225 aaKnown RBP25.32■■□□□ 1.64
CPNE1-216ENST00000437340 ALDOCP09972 364 aaKnown RBP25.32■■□□□ 1.64
CPNE1-216ENST00000437340 ARSAP15289 507 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 DCDC1P59894 354 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 OGFOD2Q6N063 350 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 METTL2BQ6P1Q9 378 aaKnown RBP25.32■■□□□ 1.64
CPNE1-216ENST00000437340 RDH14Q9HBH5 336 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 FBRSL1Q9HCM7 1045 aaKnown RBP25.32■■□□□ 1.64
CPNE1-216ENST00000437340 SMOXQ9NWM0 555 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 DKK3Q9UBP4 350 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 POLG2Q9UHN1 485 aa25.32■■□□□ 1.64
CPNE1-216ENST00000437340 PTBP2Q9UKA9 531 aaKnown RBP25.32■■□□□ 1.64
CPNE1-216ENST00000437340 OR56A5P0C7T3 313 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 PIGGQ5H8A4 983 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 ADGRG6Q86SQ4 1221 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 CCDC124Q96CT7 223 aaKnown RBP25.31■■□□□ 1.64
CPNE1-216ENST00000437340 TUBGCP3Q96CW5 907 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 CDRT15Q96T59 188 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 CCDC167Q9P0B6 97 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 NFKBIL1Q9UBC1 381 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-216ENST00000437340 IL36AQ9UHA7 158 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 REV3LO60673 3130 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 NUP210Q8TEM1 1887 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-216ENST00000437340 UPK3BL1B0FP48 263 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 UPK3BL2E5RIL1 263 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 PRR35P0CG20 571 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 ENO3P13929 434 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-216ENST00000437340 GPX3P22352 226 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 MRPL19P49406 292 aaKnown RBP25.31■■□□□ 1.64
CPNE1-216ENST00000437340 CCNIQ14094 377 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 GSTA3Q16772 222 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 ARSIQ5FYB1 569 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 XKR7Q5GH72 579 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 SORCS1Q8WY21 1168 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 NPAS2Q99743 824 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 S100A14Q9HCY8 104 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 SARDHQ9UL12 918 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 ASB1Q9Y576 335 aa25.31■■□□□ 1.64
CPNE1-216ENST00000437340 ANPEPP15144 967 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 PRDX3P30048 256 aaKnown RBP25.3■■□□□ 1.64
CPNE1-216ENST00000437340 SESN3P58005 492 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 B4GALNT1Q00973 533 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 MMEL1Q495T6 779 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 SULT1C3Q6IMI6 304 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 LRRC74BQ6ZQY2 392 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 SPATA19Q7Z5L4 167 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 MYLIPQ8WY64 445 aa25.3■■□□□ 1.64
CPNE1-216ENST00000437340 IGFLR1Q9H665 355 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms