RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DENND1AQ8TEH3 1009 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 ZNF358Q9NW07 568 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 RUVBL2Q9Y230 463 aaKnown RBP22.66■■□□□ 1.22
CPSF4-204ENST00000436336 CHUKO15111 745 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 NUAK1O60285 661 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 PFN3P60673 137 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 YPEL5P62699 121 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 DLG1Q12959 904 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 TTLL9Q3SXZ7 439 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 N4BP2L1Q5TBK1 243 aaPredicted RBP22.65■■□□□ 1.22
CPSF4-204ENST00000436336 AGAP9Q5VTM2 703 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 DOK6Q6PKX4 331 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 KYAT3Q6YP21 454 aaKnown RBP22.65■■□□□ 1.22
CPSF4-204ENST00000436336 BMP8AQ7Z5Y6 402 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 WDR5BQ86VZ2 330 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 BEND7Q8N7W2 519 aaPredicted RBP22.65■■□□□ 1.22
CPSF4-204ENST00000436336 MDM1Q8TC05 714 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 NXNL1Q96CM4 212 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 IGSF5Q9NSI5 407 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 TMEM216Q9P0N5 145 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 SLC17A7Q9P2U7 560 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 CA5BQ9Y2D0 317 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 POLR3GO15318 223 aaPredicted RBP22.65■■□□□ 1.22
CPSF4-204ENST00000436336 LILRB5O75023 590 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 CHN1P15882 459 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 AOAHP28039 575 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 CCR7P32248 378 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 KPNA2P52292 529 aaKnown RBP22.65■■□□□ 1.22
CPSF4-204ENST00000436336 IL2P60568 153 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 TRAPPC5Q8IUR0 188 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 CPNE9Q8IYJ1 553 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 SNX19Q92543 992 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 LINC00615Q96LM1 132 aaPredicted RBP22.65■■□□□ 1.22
CPSF4-204ENST00000436336 FAM111AQ96PZ2 611 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 ORAI3Q9BRQ5 295 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 CCM2Q9BSQ5 444 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 THADAQ6YHU6 1953 aa22.65■■□□□ 1.22
CPSF4-204ENST00000436336 A6NNZ2 444 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 H0Y8X5 98 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 MAP3K13O43283 966 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 GSTM1P09488 218 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 KELP23276 732 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 DGKAP23743 735 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 FNTBP49356 437 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 GSTM4Q03013 218 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 PPARDQ03181 441 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 CCDC153Q494R4 210 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 KLC3Q6P597 504 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 ABI3BPQ7Z7G0 1075 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 LONP2Q86WA8 852 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 SPNS2Q8IVW8 549 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 FBXL6Q8N531 539 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 DTWD2Q8NBA8 298 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 FAM174AQ8TBP5 190 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 ELMO1Q92556 727 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 PDLIM5Q96HC4 596 aaKnown RBP22.64■■□□□ 1.21
CPSF4-204ENST00000436336 GPR78Q96P69 363 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 DERL2Q9GZP9 239 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 C12orf65Q9H3J6 166 aaKnown RBP22.64■■□□□ 1.21
CPSF4-204ENST00000436336 RMI1Q9H9A7 625 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 NMRAL1Q9HBL8 299 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 SLC17A4Q9Y2C5 497 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 LRP4O75096 1905 aa22.64■■□□□ 1.21
CPSF4-204ENST00000436336 CBSLP0DN79 551 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 CD1DP15813 335 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 CD27P26842 260 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 CBSP35520 551 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 ETV4P43268 484 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 RGS4P49798 205 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 NFATC4Q14934 902 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 ACAP2Q15057 778 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 PLEKHS1Q5SXH7 462 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 C16orf46Q6P387 395 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 LRRTM4Q86VH4 590 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 ZNF547Q8IVP9 402 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 MAML2Q8IZL2 1156 aaPredicted RBP22.63■■□□□ 1.21
CPSF4-204ENST00000436336 SPATA6LQ8N4H0 392 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 MGARPQ8TDB4 240 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 EMCNQ9ULC0 261 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 DNMT3AQ9Y6K1 912 aaPredicted RBP22.63■■□□□ 1.21
CPSF4-204ENST00000436336 ABCA7Q8IZY2 2146 aa22.63■■□□□ 1.21
CPSF4-204ENST00000436336 TMEM202A6NGA9 273 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 EIF3FO00303 357 aaPredicted RBP22.62■■□□□ 1.21
CPSF4-204ENST00000436336 TSPAN12O95859 305 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 CEACAM5P06731 702 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 BCKDHBP21953 392 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 HTR1BP28222 390 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 RABIFP47224 123 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 ATP6V0D1P61421 351 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 CSTF1Q05048 431 aaKnown RBP22.62■■□□□ 1.21
CPSF4-204ENST00000436336 LRRC8EQ6NSJ5 796 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 LVRNQ6Q4G3 990 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 DEFB119Q8N690 84 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 EEF1AKMT1Q8WVE0 214 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 LINGO1Q96FE5 620 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 INTS9Q9NV88 658 aaKnown RBP22.62■■□□□ 1.21
CPSF4-204ENST00000436336 C17orf113A0A1B0GUU1 675 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 PLIN3O60664 434 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 APOA4P06727 396 aa22.62■■□□□ 1.21
CPSF4-204ENST00000436336 GLRBP48167 497 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms