RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 A0A1W2PNU3 283 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 CCDC78A2IDD5 438 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 MGAT4DA6NG13 374 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 USP27XA6NNY8 438 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 PLD2O14939 933 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 KRT14P02533 472 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 ATP1B2P14415 290 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 TPSB2P20231 275 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 PBLDP30039 288 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 SLC19A1P41440 591 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 NPY2RP49146 381 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 ARSDP51689 593 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 DRG2P55039 364 aaKnown RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 ERVPABLB-1P60509 514 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 GNG11P61952 73 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 CCDC173Q0VFZ6 552 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 TRA2AQ13595 282 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 TPSAB1Q15661 275 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 PHF19Q5T6S3 580 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 FOXR1Q6PIV2 292 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 TMPRSS9Q7Z410 1059 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 ZNF761Q86XN6 746 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 FBXO39Q8N4B4 442 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 OR4D9Q8NGE8 314 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 GRK7Q8WTQ7 553 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 CXorf40BQ96DE9 158 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 LINC00615Q96LM1 132 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 SLC46A1Q96NT5 459 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 NUDT22Q9BRQ3 303 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 ZMYND15Q9H091 742 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 VPS37BQ9H9H4 285 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 THSD1Q9NS62 852 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 POT1Q9NUX5 634 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 BFARQ9NZS9 450 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 AKAP7Q9P0M2 348 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 SCHIP1Q9P0W5 487 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-207ENST00000435455 ACSL5Q9ULC5 683 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 PYCARDQ9ULZ3 195 aa15.96■□□□□ 0.15
SMPD4-207ENST00000435455 CCDC162PA2VCL2 907 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 PHF2O75151 1096 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 BRAFP15056 766 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 MAGEA6P43360 314 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 FNTAP49354 379 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 PRLHRP49683 370 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 CDKN1CP49918 316 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 LIMK2P53671 638 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 SESN2P58004 480 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 SARNPP82979 210 aaKnown RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 ACVR1Q04771 509 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 GPS1Q13098 491 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 NFE2L1Q14494 772 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 TRIP13Q15645 432 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 PCID2Q5JVF3 399 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 LYPLAL1Q5VWZ2 237 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 NKAIN2Q5VXU1 208 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 METRNLQ641Q3 311 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 TMEM71Q6P5X7 295 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 AFTPHQ6ULP2 937 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 TMEM26Q6ZUK4 368 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 PIANPQ8IYJ0 282 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 BEND7Q8N7W2 519 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 OR13J1Q8NGT2 312 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 OR2L2Q8NH16 312 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 HM13Q8TCT9 377 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 HDAC10Q969S8 669 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 PRR11Q96HE9 360 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 TTC1Q99614 292 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 CMKLR1Q99788 373 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 IL22Q9GZX6 179 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 SEMA6CQ9H3T2 930 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 ASCL3Q9NQ33 180 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 SMARCAL1Q9NZC9 954 aa15.95■□□□□ 0.14
SMPD4-207ENST00000435455 ZNF624Q9P2J8 865 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-207ENST00000435455 CHD6Q8TD26 2715 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 IGHV5-10-1A0A0J9YXX1 117 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 OR52A4PA6NMU1 304 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 QSOX1O00391 747 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 HGSO14964 777 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 TLX3O43711 291 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 SGTAO43765 313 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 AP2A2O94973 939 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 ITGA2BP08514 1039 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 GSTM1P09488 218 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 JMJD7P0C870 316 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 FOXN2P32314 431 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 PPARGP37231 505 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 VPS41P49754 854 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 PRAMEP78395 509 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 GSTM4Q03013 218 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 ITIH4Q14624 930 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 DBN1Q16643 649 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 LRRC8BQ6P9F7 803 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 WDR74Q6RFH5 385 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 ZNF574Q6ZN55 896 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 FAM83HQ6ZRV2 1179 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 OR6P1Q8NGX9 317 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 SGSM3Q96HU1 749 aa15.94■□□□□ 0.14
SMPD4-207ENST00000435455 NAPGQ99747 312 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-207ENST00000435455 SLC40A1Q9NP59 571 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms