RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SLCO4A1Q96BD0 722 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 SCRN2Q96FV2 425 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 PAWRQ96IZ0 340 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 TEX37Q96LM6 180 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 HOPXQ9BPY8 73 aaPredicted RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 CORO1BQ9BR76 489 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 PCDHAC1Q9H158 963 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 ASAH2Q9NR71 780 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 ELOVL2Q9NXB9 296 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 KLHL42Q9P2K6 505 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 DTNAQ9Y4J8 743 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 TNPO3Q9Y5L0 923 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 IGLV3-16A0A075B6K0 115 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 FFAR2O15552 330 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 HSD17B1P14061 328 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 TCN1P20061 433 aaPredicted RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 LHCGRP22888 699 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 ERVK-8P63133 956 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 RBBP7Q16576 425 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 TMEM199Q8N511 208 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CLDN19Q8N6F1 224 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 NAT14Q8WUY8 206 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 GCNAQ96QF7 691 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 ACOX2Q99424 681 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SLC39A3Q9BRY0 314 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CEP44Q9C0F1 390 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SUV39H2Q9H5I1 410 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 HEBP1Q9NRV9 189 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 HCFC1R1Q9NWW0 138 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 GMPR2Q9P2T1 348 aaKnown RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 RAD51BO15315 384 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CCL16O15467 120 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CRCPO75575 148 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SLC25A14O95258 325 aaPredicted RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CHRM1P11229 460 aaPredicted RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 VCLP18206 1134 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 DDX6P26196 483 aaKnown RBP eCLIP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 HTR6P50406 440 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 NME5P56597 212 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 YBX1P67809 324 aaKnown RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 B4GALNT1Q00973 533 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 GRM2Q14416 872 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 GBX1Q14549 363 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CRY1Q16526 586 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SPATS1Q496A3 300 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 C6orf136Q5SQH8 315 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 IL23RQ5VWK5 629 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CAPRIN2Q6IMN6 1127 aaKnown RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 FBXL19Q6PCT2 694 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 LAYNQ6UX15 382 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 OTOP2Q7RTS6 562 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 KIAA0907Q7Z7F0 614 aaPredicted RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SPATA24Q86W54 205 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 TMEM25Q86YD3 366 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SLC15A3Q8IY34 581 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 ZBTB2Q8N680 514 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 ATP6V1E2Q96A05 226 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 ZUFSPQ96AP4 578 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 TCEAL4Q96EI5 215 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SLC45A3Q96JT2 553 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 TMEM79Q9BSE2 394 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 COPS7BQ9H9Q2 264 aaPredicted RBP13.75□□□□□ -0.21
HOXC4-202ENST00000430889 RDH14Q9HBH5 336 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CMTM6Q9NX76 183 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 ZIM2Q9NZV7 527 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 SCOCQ9UIL1 159 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 PCDHA9Q9Y5H5 950 aa13.75□□□□□ -0.21
HOXC4-202ENST00000430889 A0A1W2PP18 115 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 C9JVG2 144 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 DENRO43583 198 aaKnown RBP13.74□□□□□ -0.21
HOXC4-202ENST00000430889 DNAJA2O60884 412 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 EEDO75530 441 aaKnown RBP13.74□□□□□ -0.21
HOXC4-202ENST00000430889 CHEK2O96017 543 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 DGKAP23743 735 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 SLC6A2P23975 617 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 IL12AP29459 219 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 SLC7A1P30825 629 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 RGS4P49798 205 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 ATXN3P54252 364 aaPredicted RBP13.74□□□□□ -0.21
HOXC4-202ENST00000430889 ERVFC1P60507 584 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 PTSQ03393 145 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 GTF2H2Q13888 395 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 TLR1Q15399 786 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 PHKG1Q16816 387 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 GRAMD1BQ3KR37 738 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 RARS2Q5T160 578 aaKnown RBP13.74□□□□□ -0.21
HOXC4-202ENST00000430889 LRRC66Q68CR7 880 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 GTF2H2CQ6P1K8 395 aa13.74□□□□□ -0.21
HOXC4-202ENST00000430889 METTL2BQ6P1Q9 378 aaKnown RBP13.74□□□□□ -0.21
HOXC4-202ENST00000430889 MYO1HQ8N1T3 1032 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms