RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 LRTM1Q9HBL6 345 aa8.86□□□□□ -0.99
CTNND1-208ENST00000428599 RBPJLQ9UBG7 517 aa8.86□□□□□ -0.99
CTNND1-208ENST00000428599 DMTF1Q9Y222 760 aa8.86□□□□□ -0.99
CTNND1-208ENST00000428599 MAFBQ9Y5Q3 323 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-208ENST00000428599 GSC2O15499 205 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 C9P02748 559 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ZSCAN5DPP0CG00 497 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SDC2P34741 201 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ZSCAN4Q8NAM6 433 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PSMA8Q8TAA3 256 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SHC3Q92529 594 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ZBTB10Q96DT7 871 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 KLHL5Q96PQ7 755 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF184Q99676 751 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 DPYSL5Q9BPU6 564 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 C5orf60A6NFR6 353 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 HDAC3O15379 428 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 DHX15O43143 795 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 AKAP8O43823 692 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CBX6O95503 412 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ALDH4A1P30038 563 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 DGKEP52429 567 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 LSM3P62310 102 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CBX3Q13185 183 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 GFOD2Q3B7J2 385 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 AMZ1Q400G9 498 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 EIPR1Q53HC9 387 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CXorf57Q6NSI4 855 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CERS6Q6ZMG9 384 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ANKS1BQ7Z6G8 1248 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 NPAS4Q8IUM7 802 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PRSS58Q8IYP2 241 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 LNX1Q8TBB1 728 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 C1GALT1C1Q96EU7 318 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 APOLD1Q96LR9 279 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TCF12Q99081 682 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 L2HGDHQ9H9P8 463 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SMIM28A0A1B0GU29 152 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF726A6NNF4 738 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 EPHB6O15197 1021 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 OR7A10O76100 309 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CLDN9O95484 217 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TACR2P21452 398 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SLC7A1P30825 629 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 MTTPP55157 894 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CDH4P55283 916 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PRMT2P55345 433 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TSPAN5P62079 268 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 FMO1Q01740 532 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SLC25A52Q3SY17 297 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 KLHL26Q53HC5 615 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 OR2T12Q8NG77 320 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ACOT12Q8WYK0 555 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 COQ8BQ96D53 544 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TRMOQ9BU70 441 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TLR10Q9BXR5 811 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SEZ6LQ9BYH1 1024 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 GLOD4Q9HC38 313 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 DHRS12A0PJE2 317 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ONECUT3O60422 494 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 METTL18O95568 372 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PKMP14618 531 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 HTR7P34969 479 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 KIR3DL1P43629 444 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CCSAPQ6IQ19 270 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SLC8B1Q6J4K2 584 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ANKRD7Q92527 254 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 BAP1Q92560 729 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CDH19Q9H159 772 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 NUDT4Q9NZJ9 180 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ADGRE2Q9UHX3 823 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TTC34A8MYJ7 566 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TSPAN1O60635 241 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PAPSS2O95340 614 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 RENP00797 406 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 S100A6P06703 90 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 MTHFD1P11586 935 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CYP4B1P13584 511 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 GABRB2P47870 512 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PGDP52209 483 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 CAPZA1P52907 286 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SLC20A2Q08357 652 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 NAE1Q13564 534 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 DCST1Q5T197 706 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PHF13Q86YI8 300 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SLC22A15Q8IZD6 547 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 SPATA6LQ8N4H0 392 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 PGM2Q96G03 612 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 GTPBP2Q9BX10 602 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TRMT13Q9NUP7 481 aaKnown RBP8.85□□□□□ -0.99
CTNND1-208ENST00000428599 RAPGEFL1Q9UHV5 662 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 TBC1D24Q9ULP9 559 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
CTNND1-208ENST00000428599 IGLV3-22A0A075B6J6 115 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 A0A0J9YVX5 310 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 SYN3O14994 580 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 AHCYP23526 432 aa8.84□□□□□ -0.99
CTNND1-208ENST00000428599 MECP2P51608 486 aaKnown RBP8.84□□□□□ -0.99
CTNND1-208ENST00000428599 IL18R1Q13478 541 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms