RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CCNCP24863 283 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SLC18A1P54219 525 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 INCA1Q0VD86 236 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SMAD4Q13485 552 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SLC8B1Q6J4K2 584 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 CGB2Q6NT52 195 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ZBTB49Q6ZSB9 765 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 RELL1Q8IUW5 271 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SLC41A1Q8IVJ1 513 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 METTL6Q8TCB7 284 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 DENND1AQ8TEH3 1009 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 MTFMTQ96DP5 389 aaKnown RBP10.54□□□□□ -0.72
TCOF1-204ENST00000427724 ASPSCR1Q9BZE9 553 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 SRMSQ9H3Y6 488 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 KCNK12Q9HB15 430 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 FZD3Q9NPG1 666 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 PRKAB1Q9Y478 270 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 KCNE2Q9Y6J6 123 aa10.54□□□□□ -0.72
TCOF1-204ENST00000427724 LINC01565O15544 149 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 OR10H2O60403 315 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TLX1P31314 330 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 RPL14P50914 215 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 NR1H2P55055 460 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ITGADQ13349 1161 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ELAVL3Q14576 367 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 INPP5AQ14642 412 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MLF2Q15773 248 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 NEDD8Q15843 81 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 C14orf80Q86SX3 495 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 DCAF4L2Q8NA75 395 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 VN1R2Q8NFZ6 395 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ACMSDQ8TDX5 336 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 SLC25A51Q9H1U9 297 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PIF1Q9H611 641 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF358Q9NW07 568 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TMEM216Q9P0N5 145 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 YBX2Q9Y2T7 364 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 AP4S1Q9Y587 144 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 COL4A1P02462 1669 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CEP250Q9BV73 2442 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TTC34A8MYJ7 566 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 WASH3PC4AMC7 463 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MUSKO15146 869 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MID1O15344 667 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CD3EAPO15446 510 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ADH1BP00325 375 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 OAS1P00973 400 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 IMPDH2P12268 514 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 HTR7P34969 479 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PRIM2P49643 509 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CXCR3P49682 368 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CYP4F2P78329 520 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 DMWDQ09019 674 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ALFQ53S48 1182 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ERN2Q76MJ5 926 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MILR1Q7Z6M3 343 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 GPR149Q86SP6 731 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 KCTD4Q8WVF5 259 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ATL1Q8WXF7 558 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 AZIN2Q96A70 460 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 RCN3Q96D15 328 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 RTP3Q9BQQ7 232 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 GSDMCQ9BYG8 508 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 S100A14Q9HCY8 104 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 INTS7Q9NVH2 962 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 DAPK2Q9UIK4 370 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PPM1HQ9ULR3 514 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 COQ6Q9Y2Z9 468 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CFAP20Q9Y6A4 193 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 BCLAF3A2AJT9 711 aaKnown RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 SAC3D1A6NKF1 404 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 UBDO15205 165 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ZSCAN9O15535 394 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 GRIA4P48058 902 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 DUSP3P51452 185 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CCR4P51679 360 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 DSC3Q14574 896 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 C15orf39Q6ZRI6 1047 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ASRGL1Q7L266 308 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 HEATR4Q86WZ0 1026 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 HEXDCQ8WVB3 486 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 RCOR3Q9P2K3 495 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 FETUBQ9UGM5 382 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 SNX8Q9Y5X2 465 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 UPK3BL1B0FP48 263 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 UPK3BL2E5RIL1 263 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PLIN3O60664 434 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 C2P06681 752 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CHRNA4P43681 627 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PITX1P78337 314 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-204ENST00000427724 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 MAPK11Q15759 364 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PAGE2BQ5JRK9 111 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 TMEM31Q5JXX7 168 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 PARM1Q6UWI2 310 aa10.53□□□□□ -0.72
TCOF1-204ENST00000427724 CDHR3Q6ZTQ4 885 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms