RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SLC41A2Q96JW4 573 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 AGAP3Q96P47 875 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IP6K3Q96PC2 410 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RNF157Q96PX1 679 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C17orf62Q9BQA9 187 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TUBB2BQ9BVA1 445 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CASS4Q9NQ75 786 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC23A2Q9UGH3 650 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LUC7L2Q9Y383 392 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MAP4K5Q9Y4K4 846 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HEBP2Q9Y5Z4 205 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SDK2Q58EX2 2172 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HECTD1Q9ULT8 2610 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LRRK1Q38SD2 2015 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TLCD2A6NGC4 264 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MTX2O75431 263 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TMEM63AO94886 807 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PROSCO94903 275 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ALPPP05187 535 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TPM3P06753 285 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FURINP09958 794 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RAB40ALP0C0E4 278 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RALBP11234 206 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FOLR1P15328 257 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KDELR1P24390 212 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HMGCLP35914 325 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZBED6P86452 979 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TYRO3Q06418 890 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 INPP5JQ15735 1006 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FAM199XQ6PEV8 388 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 APTXQ7Z2E3 356 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DTX3LQ8TDB6 740 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CPLX3Q8WVH0 158 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TM9SF4Q92544 642 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LRRC45Q96CN5 670 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IMP4Q96G21 291 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DEF6Q9H4E7 631 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IMP3Q9NV31 184 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNHIT6Q9NWK9 470 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DTLQ9NZJ0 730 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ACSL5Q9ULC5 683 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PADI2Q9Y2J8 665 aa12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PCYT1BQ9Y5K3 369 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.49
HLA-DQB3-203ENST00000425319 A0A0A6YYK5 440 aaPredicted RBP12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IGHV5-51A0A0C4DH38 117 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 A0A1B0GTH6 734 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LRRD1A4D1F6 860 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C9J4A7 227 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 K7EM74 188 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PEX12O00623 359 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PIRTP0C851 137 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 BPIP17213 487 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CYP2A7P20853 494 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CDH3P22223 829 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 AKT1P31749 480 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SPAM1P38567 509 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ARSEP51690 589 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GBE1Q04446 702 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RPE65Q16518 533 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ATP13A4Q4VNC1 1196 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IZUMO3Q5VZ72 239 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TMEM220Q6QAJ8 160 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TMEM135Q86UB9 458 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 VSIG1Q86XK7 387 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RAB43Q86YS6 212 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RFX6Q8HWS3 928 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 D2HGDHQ8N465 521 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FER1L6-AS2Q96M78 137 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LRFN5Q96NI6 719 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MAP3K3Q99759 626 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DPH2Q9BQC3 489 aaPredicted RBP12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CCM2Q9BSQ5 444 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 BPIFA1Q9NP55 256 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LATS2Q9NRM7 1088 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GPR83Q9NYM4 423 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SEMA5BQ9P283 1151 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C5AR2Q9P296 337 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FAM153AQ9UHL3 310 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GPN3Q9UHW5 284 aaPredicted RBP12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MAST4O15021 2626 aa12□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ARHGEF17Q96PE2 2063 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GLYATL1P3A0A0U1RQE8 302 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 OR5K3A6NET4 321 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNF487B1APH4 448 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GOLGA6L19H0YKK7 550 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MEN1O00255 615 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNF185O15231 689 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PMPCBO75439 489 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DNAJB5O75953 348 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IPO13O94829 963 aaKnown RBP11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 EPOP01588 193 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MMP2P08253 660 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC35G4P0C7Q5 338 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 EBLN1P0CF75 366 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms