RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 A0A0G2JMP0 313 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PCP4L1A6NKN8 68 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 H0YAE9 185 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PLA2G6O60733 806 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 ERCC2P18074 760 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 HADHAP40939 763 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 DGKQP52824 942 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 NFE2Q16621 373 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PTCHD3Q3KNS1 767 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 AHSA2Q719I0 299 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 OR8H2Q8N162 312 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PIK3C3Q8NEB9 887 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 HDAC2Q92769 488 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PABPC5Q96DU9 382 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 OMA1Q96E52 524 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 Q96MT0 163 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 KCNS3Q9BQ31 491 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 MMP28Q9H239 520 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 EML4Q9HC35 981 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 PCDHGA10Q9Y5H3 936 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 MAU2Q9Y6X3 613 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 A0A0U1RQS6 177 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 ISPDA4D126 451 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 A8MX80 341 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 M0QYT0 321 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 TXNP10599 105 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 FCGR1AP12314 374 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 CPB1P15086 417 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 CLCN3P51790 818 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 BNIP2Q12982 314 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 TBRG1Q3YBR2 411 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 RBM48Q5RL73 367 aaKnown RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 TRIM48Q8IWZ4 208 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 MINDY1Q8N5J2 469 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 GLB1L3Q8NCI6 653 aaPredicted RBP11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 MCMBPQ9BTE3 642 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 SETD4Q9NVD3 440 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
SEC61A1-202ENST00000424880 I6L893 689 aaPredicted RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 PIGRP01833 764 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TRAF3Q13114 568 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CDK5R2Q13319 367 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CDK10Q15131 360 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 AGAP6Q5VW22 663 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TMEM207Q6UWW9 146 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 DET1Q7L5Y6 550 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TCAIMQ8N3R3 496 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 SIMC1Q8NDZ2 872 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 PCNPQ8WW12 178 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 AGAP4Q96P64 663 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF300Q96RE9 604 aaPredicted RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CASS4Q9NQ75 786 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 FBXL12Q9NXK8 326 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 POLG2Q9UHN1 485 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 VPS4AQ9UN37 437 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ANKRD6Q9Y2G4 727 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 A0A096LPI6 279 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 A8MUA0 341 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 UBXN8O00124 270 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 PDHXO00330 501 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CDK14O94921 469 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 MLYCDO95822 493 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 STAG3L1P0CL83 205 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 LMO2P25791 158 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 C21orf33P30042 268 aaPredicted RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 HTR3AP46098 478 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CRISP3P54108 245 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 KCNK10P57789 538 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TECRLQ5HYJ1 363 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TPRG1LQ5T0D9 272 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ERAP2Q6P179 960 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 DCP1BQ8IZD4 617 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 RMDN1Q96DB5 314 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CDT1Q9H211 546 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 NARFLQ9H6Q4 476 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 LRRC4Q9HBW1 653 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 PCDHB14Q9Y5E9 798 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 A0A1W2PQ72 361 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ERI2A8K979 691 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 H0Y626 953 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 hCG_2039718K7EN88 272 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 ARHGAP33O14559 1287 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 TRIM16O95361 564 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 HSMCR30P0CW71 290 aa11.16□□□□□ -0.62
SEC61A1-202ENST00000424880 CYP2B6P20813 491 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms