RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 STAMQ92783 540 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ZNF558Q96NG5 402 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TRIB1Q96RU8 372 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CYTH2Q99418 400 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CTRCQ99895 268 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CNPPD1Q9BV87 410 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 NUP58Q9BVL2 599 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 HEMGNQ9BXL5 484 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 BCL2L14Q9BZR8 327 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 C6orf62Q9GZU0 229 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 COPS7BQ9H9Q2 264 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 CERS4Q9HA82 394 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 EPB41L5Q9HCM4 733 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MRPL47Q9HD33 250 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 SNX15Q9NRS6 342 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ZNF275Q9NSD4 429 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 CTNNAL1Q9UBT7 734 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 NARFQ9UHQ1 456 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CPA4Q9UI42 421 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CAMK2AQ9UQM7 478 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 SRPRBQ9Y5M8 271 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 KLF2Q9Y5W3 355 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 SMG6Q86US8 1419 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 A0A0U1RQJ8 604 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RNF103-CHMP3A0A140T963 221 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 A0A1W2PN81 502 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MEX3AA1L020 520 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 RAB19A4D1S5 217 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 OR5K3A6NET4 321 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 OR6C75A6NL08 312 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 AGAP14A8MT82 685 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 IQCF5A8MTL0 148 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RNF103O00237 685 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RASGRF2O14827 1237 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 DCLK1O15075 740 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 POLR1CO15160 346 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 NDUFS2O75306 463 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PSIP1O75475 530 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 GMNNO75496 209 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CRCPO75575 148 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 JTBO76095 146 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TMEM63AO94886 807 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PDE8BO95263 885 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PGLSO95336 258 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PTBP3O95758 552 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 BMP15O95972 392 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ZCCHC18P0CG32 403 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 COX5BP10606 129 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 GNSP15586 552 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 HOXB6P17509 224 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 TYMPP19971 482 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PDHA2P29803 388 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 GNA11P29992 359 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PPP2R1AP30153 589 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 SLC7A1P30825 629 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MAT2AP31153 395 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 CHRNA7P36544 502 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PIK3CBP42338 1070 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PIP4K2AP48426 406 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 SLC11A1P49279 550 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 NDUFV1P49821 464 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CCR5P51681 352 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ZNF41P51814 821 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 STX17P56962 302 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MRPS25P82663 173 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 HPCAP84074 193 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PMP22Q01453 160 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MC2RQ01718 297 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 YWHAHQ04917 246 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 LRMPQ12912 555 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 NOGQ13253 232 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TRA2AQ13595 282 aaKnown RBP eCLIP2.86□□□□□ -1.95
PMS1-209ENST00000424059 FASTKD3Q14CZ7 662 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 FAM187BQ17R55 369 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 HFEQ30201 348 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MCMDC2Q4G0Z9 681 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 DNAL1Q4LDG9 190 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CTXN3Q4LDR2 81 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MTX3Q5HYI7 312 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CDKL4Q5MAI5 379 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD20A2Q5SQ80 823 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TTC22Q5TAA0 569 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD20A1Q5TYW2 823 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 FAM109BQ6ICB4 259 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 RINT1Q6NUQ1 792 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD16Q6P6B7 361 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TRAT1Q6PIZ9 186 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 KLHL24Q6TFL4 600 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 METAP1DQ6UB28 335 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 ZNF813Q6ZN06 617 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 OVCH2Q7RTZ1 564 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CACNA2D4Q7Z3S7 1137 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CAMKMTQ7Z624 323 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TMCO2Q7Z6W1 182 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 AMIGO2Q86SJ2 522 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ADAMTSL2Q86TH1 951 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TTC7BQ86TV6 843 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MON1AQ86VX9 555 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 ZCCHC7Q8N3Z6 543 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 ICA1LQ8NDH6 482 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms