RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 STX7O15400 261 aaKnown RBP14.92□□□□□ -0.02
USB1-202ENST00000423271 TJP3O95049 919 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 VIPP01282 170 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 TYRP1P17643 537 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 IDSP22304 550 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 SEL1L2Q5TEA6 688 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 DARS2Q6PI48 645 aaKnown RBP14.92□□□□□ -0.02
USB1-202ENST00000423271 ABRAXAS1Q6UWZ7 409 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 RANBP10Q6VN20 620 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 SLC35F6Q8N357 371 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 AVL9Q8NBF6 648 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 DTX3LQ8TDB6 740 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 NAT14Q8WUY8 206 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 NKD1Q969G9 470 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 TTC25Q96NG3 672 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 UCK1Q9HA47 277 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 APMAPQ9HDC9 416 aa14.92□□□□□ -0.02
USB1-202ENST00000423271 BOD1L1Q8NFC6 3051 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 OR2AG2A6NM03 316 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 PRAMEF1O95521 474 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 RAB15P59190 212 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 CYP4F2P78329 520 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 KLF1Q13351 362 aaPredicted RBP14.91□□□□□ -0.02
USB1-202ENST00000423271 ITGA9Q13797 1035 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 CLCA4Q14CN2 919 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 LDLRAP1Q5SW96 308 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 DCAF12Q5T6F0 453 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 AGAP9Q5VTM2 703 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 TMEM220Q6QAJ8 160 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 WASH2PQ6VEQ5 465 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 FAM83HQ6ZRV2 1179 aaPredicted RBP14.91□□□□□ -0.02
USB1-202ENST00000423271 MICALCLQ6ZW33 695 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 OR4K2Q8NGD2 314 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 GPR150Q8NGU9 434 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 BRSK1Q8TDC3 778 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 RSC1A1Q92681 617 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 RTP4Q96DX8 246 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 SPATA13Q96N96 652 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 ZCCHC2Q9C0B9 1178 aaKnown RBP14.91□□□□□ -0.02
USB1-202ENST00000423271 EPB41L1Q9H4G0 881 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 WASH6PQ9NQA3 447 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 POT1Q9NUX5 634 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 FKBPLQ9UIM3 349 aa14.91□□□□□ -0.02
USB1-202ENST00000423271 RAD1O60671 282 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 PPFIA2O75334 1257 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 POP7O75817 140 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 STK10O94804 968 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 UBXN7O94888 489 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 C9P02748 559 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 VCLP18206 1134 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 LPOP22079 712 aaPredicted RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 PBLDP30039 288 aaPredicted RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 AKT1P31749 480 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 LEPRP48357 1165 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 ATP1A2P50993 1020 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 MC2RQ01718 297 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 DMPKQ09013 629 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 MSLNQ13421 630 aaPredicted RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 GPR18Q14330 331 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 NFE2L1Q14494 772 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 SPARCL1Q14515 664 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 TAF1AQ15573 450 aaPredicted RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 LINC00303Q3SY05 128 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 DET1Q7L5Y6 550 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 AMZ2Q86W34 360 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 SLC13A5Q86YT5 568 aaPredicted RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 PLXDC1Q8IUK5 500 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 BEND7Q8N7W2 519 aaPredicted RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 OR13C4Q8NGS5 318 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 ZNF398Q8TD17 642 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 EXTL1Q92935 676 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 RNF31Q96EP0 1072 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 C9orf72Q96LT7 481 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 TGM7Q96PF1 710 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 TBL1YQ9BQ87 522 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 FERMT1Q9BQL6 677 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 ASPSCR1Q9BZE9 553 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 SLC40A1Q9NP59 571 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 SIDT1Q9NXL6 827 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.9□□□□□ -0.02
USB1-202ENST00000423271 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 R3HDM2Q9Y2K5 976 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 AAR2Q9Y312 384 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 TLN1Q9Y490 2541 aaKnown RBP14.9□□□□□ -0.02
USB1-202ENST00000423271 SPTA1P02549 2419 aa14.9□□□□□ -0.02
USB1-202ENST00000423271 GOLGA6L9A6NEM1 432 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 C2orf81A6NN90 581 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 KIF5CO60282 957 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 ANKRD34CP0C6C1 535 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 LIFP15018 202 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 AMD1P17707 334 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 CAPZBP47756 277 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 XIAPP98170 497 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 FNBP1LQ5T0N5 605 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 DENND5AQ6IQ26 1287 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 CACNA2D3Q8IZS8 1091 aa14.89□□□□□ -0.03
USB1-202ENST00000423271 IL22RA1Q8N6P7 574 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms