RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SLF1Q9BQI6 1058 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 PUS3Q9BZE2 481 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 GPR63Q9BZJ6 419 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 FTOQ9C0B1 505 aaKnown RBP eCLIP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 LSG1Q9H089 658 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 RNPEPL1Q9HAU8 725 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 BEX4Q9NWD9 120 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 BABAM1Q9NWV8 329 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 RHBDL2Q9NX52 303 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 PPP1R14DQ9NXH3 145 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ANKRD10Q9NXR5 420 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 RRN3Q9NYV6 651 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 HMG20BQ9P0W2 317 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 HCN3Q9P1Z3 774 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 RNF14Q9UBS8 474 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC13A4Q9UKG4 626 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 INO80Q9ULG1 1556 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 KIAA1210Q9ULL0 1709 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TBX20Q9UMR3 447 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SATB2Q9UPW6 733 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 R3HDM2Q9Y2K5 976 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ERVK-7P63135 1459 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 AFF2P51816 1311 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 MROH7Q68CQ1 1323 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CHD2O14647 1828 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 UNC13BO14795 1591 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NEURL4Q96JN8 1562 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 BCL9O00512 1426 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 A0A1B0GVG6 124 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SMIM31A0A1B0GVY4 71 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 HTR3EA5X5Y0 456 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 GAGE10A6NGK3 116 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 RRN3P2A6NIE6 340 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 I6L893 689 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 O00370 1275 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NCAM2O15394 837 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 LDB2O43679 373 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 KCNJ13O60928 360 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SOCS5O75159 536 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TBCAO75347 108 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SUPT3HO75486 399 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SERPINI2O75830 405 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 STAM2O75886 525 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ATP5HO75947 161 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 GFPT2O94808 682 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PLGP00747 810 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TSPY4P0CV99 314 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TSPY10P0CW01 314 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 IRF1P10914 325 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PORP16435 677 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PRLRP16471 622 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TCP1P17987 556 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CD72P21854 359 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CALB2P22676 271 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 POU1F1P28069 291 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 C21orf33P30042 268 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 DCTDP32321 178 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CA8P35219 290 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TCF7P36402 384 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 HSPA9P38646 679 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PAFAH1B1P43034 410 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 MSH2P43246 934 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PMS2P54278 862 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 KRT83P78385 493 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 HPCAP84074 193 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 Q0VFX4 171 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ITGB3BPQ13352 177 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ITGA9Q13797 1035 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CAMK1Q14012 370 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CYLC2Q14093 348 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 LPIN1Q14693 890 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NONOQ15233 471 aaKnown RBP eCLIP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 GPR68Q15743 365 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 IMMTQ16891 758 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TMEM95Q3KNT9 176 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 OR52E8Q6IFG1 317 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 BLOC1S2Q6QNY1 142 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC22A25Q6T423 547 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PACS1Q6VY07 963 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NLRP9Q7RTR0 991 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TRPM8Q7Z2W7 1104 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TBC1D1Q86TI0 1168 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TBC1D26Q86UD7 250 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 FJX1Q86VR8 437 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 LURAP1LQ8IV03 231 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CPOQ8IVL8 374 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 MAP7D3Q8IWC1 876 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TTC39CQ8N584 583 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PPFIBP2Q8ND30 876 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 GDAP1Q8TB36 358 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCDC110Q8TBZ0 833 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NEK9Q8TD19 979 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 DQX1Q8TE96 717 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM216AQ8WUB2 273 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 USP6NLQ92738 828 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 AZIN2Q96A70 460 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 LRRC45Q96CN5 670 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 KLHL29Q96CT2 875 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms