RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CCNL2Q96S94 520 aaPredicted RBP16.17■□□□□ 0.18
LINC00404-201ENST00000418660 SLC40A1Q9NP59 571 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 LZTFL1Q9NQ48 299 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 CRLS1Q9UJA2 301 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 WDR37Q9Y2I8 494 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 ZNF106Q9H2Y7 1883 aaKnown RBP16.16■□□□□ 0.18
LINC00404-201ENST00000418660 A8MU76 341 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 B4E171 279 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.16■□□□□ 0.18
LINC00404-201ENST00000418660 UBXN7O94888 489 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 TPH1P17752 444 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 ITGALP20701 1170 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 TSPAN7P41732 249 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 TGIF1Q15583 401 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 GPR33Q49SQ1 333 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 BCL7AQ4VC05 210 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 CCDC81Q6ZN84 652 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 FAM83HQ6ZRV2 1179 aaPredicted RBP16.16■□□□□ 0.18
LINC00404-201ENST00000418660 DET1Q7L5Y6 550 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 SNX20Q7Z614 316 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 LINC00523Q86TU6 105 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 ZFAND4Q86XD8 727 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 DTX1Q86Y01 620 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 NXPE1Q8N323 547 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 HEXDCQ8WVB3 486 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 C1orf54Q8WWF1 131 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 ART4Q93070 314 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 DCUN1D1Q96GG9 259 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 DDA1Q9BW61 102 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 NLE1Q9NVX2 485 aaPredicted RBP16.16■□□□□ 0.18
LINC00404-201ENST00000418660 OCIAD1Q9NX40 245 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 SLC39A1Q9NY26 324 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 OGFRQ9NZT2 677 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 ZNF148Q9UQR1 794 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 PCDHB11Q9Y5F2 797 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 SLC30A1Q9Y6M5 507 aa16.16■□□□□ 0.18
LINC00404-201ENST00000418660 MN1Q10571 1320 aaPredicted RBP16.16■□□□□ 0.18
LINC00404-201ENST00000418660 MGAT4DA6NG13 374 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 EFCAB7A8K855 629 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 ERI2A8K979 691 aaKnown RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 H7C0S8 307 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 K7ENP7 123 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 C9P02748 559 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 RALBP11234 206 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 AMD1P17707 334 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 MC4RP32245 332 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 CCZ1BP86790 482 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 CCZ1P86791 482 aaPredicted RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 NFE2L1Q14494 772 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 RPE65Q16518 533 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 METRNLQ641Q3 311 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 INO80CQ6PI98 192 aaPredicted RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 FAM129CQ86XR2 697 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 TAB3Q8N5C8 712 aaPredicted RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 BEND7Q8N7W2 519 aaPredicted RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 BMPERQ8N8U9 685 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 OR2L2Q8NH16 312 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 STYXQ8WUJ0 223 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 DNAJC1Q96KC8 554 aaKnown RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 LINC00615Q96LM1 132 aaPredicted RBP16.15■□□□□ 0.18
LINC00404-201ENST00000418660 COPS8Q99627 209 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 ASPSCR1Q9BZE9 553 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 FAM96AQ9H5X1 160 aa16.15■□□□□ 0.18
LINC00404-201ENST00000418660 PTPRQQ9UMZ3 2332 aa16.14■□□□□ 0.18
LINC00404-201ENST00000418660 NBEAQ8NFP9 2946 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 CCL22O00626 93 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 ATXN7O15265 892 aaPredicted RBP16.14■□□□□ 0.17
LINC00404-201ENST00000418660 SGTAO43765 313 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 NRDCO43847 1150 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 IFNB1P01574 187 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 ANKRD34CP0C6C1 535 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 TYRP1P17643 537 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 PBLDP30039 288 aaPredicted RBP16.14■□□□□ 0.17
LINC00404-201ENST00000418660 FDFT1P37268 417 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 ARSDP51689 593 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 RAB15P59190 212 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 MC2RQ01718 297 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 SNX1Q13596 522 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 SEPT6Q14141 434 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 GPR18Q14330 331 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 POU6F1Q14863 301 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 DCAF12Q5T6F0 453 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 LSM14AQ8ND56 463 aaKnown RBP16.14■□□□□ 0.17
LINC00404-201ENST00000418660 TRIM58Q8NG06 486 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 PMEPA1Q969W9 287 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 CDKN2AIPNLQ96HQ2 116 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 C9orf72Q96LT7 481 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 ETNK1Q9HBU6 452 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 WDR70Q9NW82 654 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 ZDHHC3Q9NYG2 299 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 KLHL3Q9UH77 587 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 ACSL5Q9ULC5 683 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 PSMD13Q9UNM6 376 aa16.14■□□□□ 0.17
LINC00404-201ENST00000418660 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
LINC00404-201ENST00000418660 IGLV3-16A0A075B6K0 115 aa16.13■□□□□ 0.17
LINC00404-201ENST00000418660 TRBV5-4A0A0C4DH59 114 aa16.13■□□□□ 0.17
LINC00404-201ENST00000418660 CFAP99D6REC4 459 aa16.13■□□□□ 0.17
LINC00404-201ENST00000418660 STMND1H3BQB6 276 aa16.13■□□□□ 0.17
LINC00404-201ENST00000418660 TOX3O15405 576 aaPredicted RBP16.13■□□□□ 0.17
LINC00404-201ENST00000418660 EFSO43281 561 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms