RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ACRV1P26436 265 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 FOXN2P32314 431 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 PRLHRP49683 370 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 GTF2H3Q13889 308 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 GPR33Q49SQ1 333 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 FNBP1LQ5T0N5 605 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 METRNLQ641Q3 311 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 TMEM71Q6P5X7 295 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 WDR74Q6RFH5 385 aaPredicted RBP20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 ARHGAP22Q7Z5H3 698 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 AMZ2Q86W34 360 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 LILRA3Q8N6C8 439 aaPredicted RBP20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 GPR150Q8NGU9 434 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 OR2L2Q8NH16 312 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 COG1Q8WTW3 980 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 MAIP1Q8WWC4 291 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 DCBLD2Q96PD2 775 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC38A3Q99624 504 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 STRADBQ9C0K7 418 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 THSD1Q9NS62 852 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 RIMKLBQ9ULI2 386 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 FAM208BQ5VWN6 2430 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 HGSO14964 777 aaPredicted RBP20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 CCL4P13236 92 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 MSH3P20585 1137 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 ITGALP20701 1170 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 IDSP22304 550 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 MPSTP25325 297 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 PCBP4P57723 403 aaKnown RBP20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 TLE3Q04726 772 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 TRA2AQ13595 282 aaKnown RBP eCLIP20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 CYP1B1Q16678 543 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 TMEM26Q6ZUK4 368 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 SPACA3Q8IXA5 215 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 CCDC89Q8N998 374 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 PMEPA1Q969W9 287 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 TMEM159Q96B96 161 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 ULK4Q96C45 1275 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 LRRC45Q96CN5 670 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 ZNF514Q96K75 400 aaPredicted RBP20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 TTC25Q96NG3 672 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 DPYSL5Q9BPU6 564 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 POT1Q9NUX5 634 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 ZDHHC3Q9NYG2 299 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 CRLS1Q9UJA2 301 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 MN1Q10571 1320 aaPredicted RBP20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 AHCTF1Q8WYP5 2266 aa20.22■□□□□ 0.83
PKNOX1-202ENST00000418336 TCRBV7S3A2A0A539 114 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 CCDC78A2IDD5 438 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 MGAT4DA6NG13 374 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 C9orf172C9J069 976 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 C9P02748 559 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 FGF3P11487 239 aaPredicted RBP20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 AKT1P31749 480 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 SEPT6Q14141 434 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 RPE65Q16518 533 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 DBN1Q16643 649 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 PHF19Q5T6S3 580 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 TSTD2Q5T7W7 516 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 SERPINA9Q86WD7 417 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 BMPERQ8N8U9 685 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 ZNF248Q8NDW4 579 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 SH3KBP1Q96B97 665 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 PBKQ96KB5 322 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 COPS8Q99627 209 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 FOXJ2Q9P0K8 574 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 PISDQ9UG56 409 aa20.21■□□□□ 0.83
PKNOX1-202ENST00000418336 CCDC162PA2VCL2 907 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 PDZK1P1A8MUH7 402 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 AGRPO00253 132 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 APRTP07741 180 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 ATP1B2P14415 290 aaPredicted RBP20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 RBMS1P29558 406 aaKnown RBP20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 SLC5A2P31639 672 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 MAGEA6P43360 314 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 CACNG1Q06432 222 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 GPR18Q14330 331 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 FOXR1Q6PIV2 292 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 AVL9Q8NBF6 648 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 OR10G6Q8NH81 332 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 OSBPL9Q96SU4 736 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 PRORYQ9H606 182 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 TCAF1Q9Y4C2 921 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 PRSS21Q9Y6M0 314 aa20.2■□□□□ 0.82
PKNOX1-202ENST00000418336 MGAQ8IWI9 3026 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 PIKFYVEQ9Y2I7 2098 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 HEATR9A2RTY3 570 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 FANCGO15287 622 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 NVLO15381 856 aaKnown RBP20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 ZW10O43264 779 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 ZSCAN12O43309 604 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 DUX1O43812 170 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 ADRA1DP25100 572 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 CLN3Q13286 438 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 BIRC2Q13490 618 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 SEMA3AQ14563 771 aa20.19■□□□□ 0.82
PKNOX1-202ENST00000418336 KCNJ11Q14654 390 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms