RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 LACTB2Q53H82 288 aaPredicted RBP20.47■□□□□ 0.87
CASC3-203ENST00000418132 ADAMTSL4Q6UY14 1074 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 PREBQ9HCU5 417 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 WNT16Q9UBV4 365 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 NCKAP1Q9Y2A7 1128 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 TCRBV21S2A2A0A5A6 115 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 CHURC1-FNTBB4DL54 471 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 IPO13O94829 963 aaKnown RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 TPBGLP0DKB5 382 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 CBSLP0DN79 551 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 ACADMP11310 421 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 MTHFD2P13995 350 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 GABRG2P18507 467 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 CBSP35520 551 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 NFKB2Q00653 900 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 ACTN3Q08043 901 aaPredicted RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 OVGP1Q12889 678 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 GBX1Q14549 363 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 ACSBG2Q5FVE4 666 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 PNCKQ6P2M8 343 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 ATG14Q6ZNE5 492 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 SLC22A9Q8IVM8 553 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 PLA2G15Q8NCC3 412 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 FUBP1Q96AE4 644 aaKnown RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 EPHX3Q9H6B9 360 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 RNF112Q9ULX5 631 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 KRBA1A5PL33 1030 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 NPEPPSL1A6NEC2 478 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 EIF3FO00303 357 aaPredicted RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 LYPLA1O75608 230 aaPredicted RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 FTH1P02794 183 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 TARSP26639 723 aaKnown RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 FGL2Q14314 439 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 MAP7D1Q3KQU3 841 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 NEK5Q6P3R8 708 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 TRPM8Q7Z2W7 1104 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 PIWIL4Q7Z3Z4 852 aaKnown RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 SORT1Q99523 831 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 ZCCHC2Q9C0B9 1178 aaKnown RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 KLHL14Q9P2G3 628 aa20.46■□□□□ 0.87
CASC3-203ENST00000418132 MRPS17Q9Y2R5 130 aaKnown RBP20.46■□□□□ 0.87
CASC3-203ENST00000418132 OR2AG2A6NM03 316 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 KPNA5O15131 536 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 SMIM24O75264 130 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 TROVE2P10155 538 aaKnown RBP eCLIP20.45■□□□□ 0.862e-7■□□□□ 11.1
CASC3-203ENST00000418132 PRLHRP49683 370 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 CTSCP53634 463 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 STARD6P59095 220 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 NUMA1Q14980 2115 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 KIAA1324Q6UXG2 1013 aaKnown RBP20.45■□□□□ 0.86
CASC3-203ENST00000418132 ADGRG6Q86SQ4 1221 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 CRLF3Q8IUI8 442 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 MYO1HQ8N1T3 1032 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 COX14Q96I36 57 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 DRC3Q9H069 523 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 TRIM39Q9HCM9 518 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 ARL2BPQ9Y2Y0 163 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 CAPN7Q9Y6W3 813 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 A0A1W2PQU0 124 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 C19orf67A6NJJ6 358 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 SYCE1LA8MT33 242 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 UBXN8O00124 270 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 RNGTTO60942 597 aaKnown RBP20.45■□□□□ 0.86
CASC3-203ENST00000418132 ENO3P13929 434 aaPredicted RBP20.45■□□□□ 0.86
CASC3-203ENST00000418132 TEAD1P28347 426 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 LRRC32Q14392 662 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 PLEKHS1Q5SXH7 462 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 CYHR1Q6ZMK1 362 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 TRIM67Q6ZTA4 783 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 SYT13Q7L8C5 426 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 TRIM74Q86UV6 250 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 HORMAD1Q86X24 394 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 HIC2Q96JB3 615 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 TRIM55Q9BYV6 548 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 OSBPL6Q9BZF3 934 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 ACTR5Q9H9F9 607 aaPredicted RBP20.45■□□□□ 0.86
CASC3-203ENST00000418132 LMAN1LQ9HAT1 526 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 CYP4F12Q9HCS2 524 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 NCKIPSDQ9NZQ3 722 aa20.45■□□□□ 0.86
CASC3-203ENST00000418132 CDK14O94921 469 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 PAK4O96013 591 aaPredicted RBP20.44■□□□□ 0.86
CASC3-203ENST00000418132 FZD5Q13467 585 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 RCN2Q14257 317 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 BEND7Q8N7W2 519 aaPredicted RBP20.44■□□□□ 0.86
CASC3-203ENST00000418132 TP53I13Q8NBR0 393 aaPredicted RBP20.44■□□□□ 0.86
CASC3-203ENST00000418132 PHF21BQ96EK2 531 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 L3HYPDHQ96EM0 354 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 SHDQ96IW2 340 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 LENG8Q96PV6 779 aaPredicted RBP20.44■□□□□ 0.86
CASC3-203ENST00000418132 TMEM237Q96Q45 408 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 SLC17A9Q9BYT1 436 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 NPHS2Q9NP85 383 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 POLMQ9NP87 494 aaPredicted RBP20.44■□□□□ 0.86
CASC3-203ENST00000418132 LTB4R2Q9NPC1 389 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 ABCF3Q9NUQ8 709 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 TRIOO75962 3097 aa20.44■□□□□ 0.86
CASC3-203ENST00000418132 DOCK9Q9BZ29 2069 aa20.43■□□□□ 0.86
CASC3-203ENST00000418132 TBC1D3DA0A087WVF3 549 aa20.43■□□□□ 0.86
CASC3-203ENST00000418132 TBC1D3IA0A087WXS9 549 aa20.43■□□□□ 0.86
CASC3-203ENST00000418132 TBC1D3EA0A087X179 549 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms