RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 UGT3A2Q3SY77 523 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 PLEKHS1Q5SXH7 462 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 NXNQ6DKJ4 435 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 FBXL19Q6PCT2 694 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 TTC23LQ6PF05 361 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 RINLQ6ZS11 566 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 RPS27LQ71UM5 84 aaKnown RBP16.55■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF765Q7L2R6 523 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 OR56A4Q8NGH8 313 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 AGAP11Q8TF27 550 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 RAB7BQ96AH8 199 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 CCT7Q99832 543 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 TRMT61BQ9BVS5 477 aaKnown RBP16.55■□□□□ 0.24
SSBP3-205ENST00000417664 NUSAP1Q9BXS6 441 aaKnown RBP16.55■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF385DQ9H6B1 395 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 MID1IP1Q9NPA3 183 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 DYRK4Q9NR20 520 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 CLEC1BQ9P126 229 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 TMPRSS11EQ9UL52 423 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 PLXNA2O75051 1894 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 WNT9AO14904 365 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 FFAR2O15552 330 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 APODP05090 189 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 JUNP05412 331 aaKnown RBP16.54■□□□□ 0.24
SSBP3-205ENST00000417664 MSH3P20585 1137 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 AOAHP28039 575 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 AKT1P31749 480 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 ETV3P41162 512 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 PKNOX1P55347 436 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 GBX1Q14549 363 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 HERC3Q15034 1050 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 ZRSR2Q15696 482 aaKnown RBP16.54■□□□□ 0.24
SSBP3-205ENST00000417664 ACSBG2Q5FVE4 666 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 KANK2Q63ZY3 851 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 CYHR1Q6ZMK1 362 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 CHSY3Q70JA7 882 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 MTSS1LQ765P7 747 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 RBM15BQ8NDT2 890 aaKnown RBP16.54■□□□□ 0.24
SSBP3-205ENST00000417664 TRPC4APQ8TEL6 797 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 BTN2A2Q8WVV5 523 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 SCAMP4Q969E2 229 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 FAM129BQ96TA1 746 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 PLA2G2FQ9BZM2 168 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 TNFRSF12AQ9NP84 129 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 CD84Q9UIB8 345 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 SARDHQ9UL12 918 aa16.54■□□□□ 0.24
SSBP3-205ENST00000417664 PIKFYVEQ9Y2I7 2098 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 AREL1O15033 823 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NUAK1O60285 661 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 VPS4BO75351 444 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 WFS1O76024 890 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ESRRBO95718 433 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 FTH1P02794 183 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ENO2P09104 434 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 HLA-EP13747 358 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 VCLP18206 1134 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ITGB6P18564 788 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 CREB5Q02930 508 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 GRM2Q14416 872 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 FAM46CQ5VWP2 391 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 SULT1C3Q6IMI6 304 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NEK10Q6ZWH5 1172 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NLRP8Q86W28 1048 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 PELI3Q8N2H9 469 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 RP9Q8TA86 221 aaKnown RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 C19orf60Q96EN9 201 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 DTD2Q96FN9 168 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 COQ10AQ96MF6 247 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF382Q96SR6 550 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 RIOK2Q9BVS4 552 aaKnown RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 PTBP2Q9UKA9 531 aaKnown RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 COL4A3Q01955 1670 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NCF1BA6NI72 391 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 CCDC85CA6NKD9 419 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NCF1CA8MVU1 366 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 E2F3O00716 465 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 SKAP2O75563 359 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 CHEK2O96017 543 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 MPC1LP0DKB6 136 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 COX4I1P13073 169 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ADRB3P13945 408 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NCF1P14598 390 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 GDI1P31150 447 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 GRIN2CQ14957 1233 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ACOX1Q15067 660 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 WASHC2DQ5SRD0 308 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 PARM1Q6UWI2 310 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 GLYATL1Q969I3 302 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ARRDC3Q96B67 414 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 AP2M1Q96CW1 435 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 PPP1R36Q96LQ0 422 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 NSUN5Q96P11 429 aaKnown RBP16.53■□□□□ 0.24
SSBP3-205ENST00000417664 KXD1Q9BQD3 176 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 RTKNQ9BST9 563 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 HGH1Q9BTY7 390 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 HDAC8Q9BY41 377 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ABCG8Q9H221 673 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 ZBTB26Q9HCK0 441 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 FIS1Q9Y3D6 152 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms