RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 F3P13726 295 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 PAMP19021 973 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 SPINK2P20155 84 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 PMLP29590 882 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 NSG1P42857 185 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 ARCN1P48444 511 aaKnown RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 DRG2P55039 364 aaKnown RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 ARL4CP56559 192 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 SLC7A5Q01650 507 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 DMPKQ09013 629 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 CALCOCO2Q13137 446 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 ILKQ13418 452 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 TUBB2AQ13885 445 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 HIF1AQ16665 826 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 HP1BP3Q5SSJ5 553 aaPredicted RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 LYPLAL1Q5VWZ2 237 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 XKR5Q6UX68 686 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 CERS6Q6ZMG9 384 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 RAB44Q7Z6P3 723 aaPredicted RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 TMEM135Q86UB9 458 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 IGDCC3Q8IVU1 814 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 PDIK1LQ8N165 341 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 ARL14Q8N4G2 192 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 CHCHD4Q8N4Q1 142 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 NOA1Q8NC60 698 aaKnown RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 BBOF1Q8ND07 529 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 MNS1Q8NEH6 495 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 MAPK15Q8TD08 544 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 CCDC3Q9BQI4 270 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 TUBB2BQ9BVA1 445 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 RAB17Q9H0T7 212 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 SCHIP1Q9P0W5 487 aaPredicted RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 WHRNQ9P202 907 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 UTP11Q9Y3A2 253 aaKnown RBP12.26□□□□□ -0.45
SKA1-203ENST00000417656 PIKFYVEQ9Y2I7 2098 aa12.26□□□□□ -0.45
SKA1-203ENST00000417656 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 CTAGE15A4D2H0 777 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 MGAT4DA6NG13 374 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 NDC80O14777 642 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 AP2A2O94973 939 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 TRIM16O95361 564 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 CTAGE8P0CG41 777 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 SLC2A4P14672 509 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 BRAFP15056 766 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 GLB1P16278 677 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 IDSP22304 550 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 RPL10P27635 214 aaKnown RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 ELK3P41970 407 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 TTPAP49638 278 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 INSM1Q01101 510 aaPredicted RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 BIRC2Q13490 618 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 CRYMQ14894 314 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 FASTKD3Q14CZ7 662 aaKnown RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 TYSND1Q2T9J0 566 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 HES3Q5TGS1 186 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 ZNF470Q6ECI4 717 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 CTAGE6Q86UF2 777 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 ZNF761Q86XN6 746 aaPredicted RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 CTAGE4Q8IX94 777 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 UNC5BQ8IZJ1 945 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 SFRP1Q8N474 314 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 LILRA3Q8N6C8 439 aaPredicted RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
SKA1-203ENST00000417656 OR2L2Q8NH16 312 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 HM13Q8TCT9 377 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 LKAAEAR1Q8TD35 194 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 CFAP36Q96G28 342 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 LINC00615Q96LM1 132 aaPredicted RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 TTC1Q99614 292 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 EBNA1BP2Q99848 306 aaKnown RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 LRRC1Q9BTT6 524 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 LRIT1Q9P2V4 623 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 PSMD13Q9UNM6 376 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 WDR37Q9Y2I8 494 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 DNMT3AQ9Y6K1 912 aaPredicted RBP12.25□□□□□ -0.45
SKA1-203ENST00000417656 RP1P56715 2156 aa12.25□□□□□ -0.45
SKA1-203ENST00000417656 KIR2DS5A0A0G2JLQ3 304 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 A0A0G2JNG1 304 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 UBA6A0AVT1 1052 aaPredicted RBP12.24□□□□□ -0.45
SKA1-203ENST00000417656 OR52A4PA6NMU1 304 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 RHPN2P1A8MT19 583 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 KIR2DS3K7RE56 304 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 NUDT21O43809 227 aaKnown RBP12.24□□□□□ -0.45
SKA1-203ENST00000417656 OPA1O60313 960 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 KCNJ13O60928 360 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 NDUFS3O75489 264 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 RPLP0P05388 317 aaKnown RBP12.24□□□□□ -0.45
SKA1-203ENST00000417656 POLBP06746 335 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 ITGB6P18564 788 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 OGNP20774 298 aaKnown RBP12.24□□□□□ -0.45
SKA1-203ENST00000417656 PDIA2Q13087 525 aaKnown RBP12.24□□□□□ -0.45
SKA1-203ENST00000417656 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
SKA1-203ENST00000417656 KIR2DS5Q14953 304 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 TRADDQ15628 312 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 LONRF1Q17RB8 773 aa12.24□□□□□ -0.45
SKA1-203ENST00000417656 MRNIPQ6NTE8 343 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms