RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 ADARP55265 1226 aaKnown RBP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 DNAJC3Q13217 504 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 TCEA2Q15560 299 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ZNF658BQ4V348 819 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 RNF187Q5TA31 235 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 METRNLQ641Q3 311 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 NEPROQ6NW34 567 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 MICALCLQ6ZW33 695 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ERMP1Q7Z2K6 904 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 SLCO6A1Q86UG4 719 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 LRRC6Q86X45 466 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 SFRP1Q8N474 314 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CALML6Q8TD86 181 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CCDC97Q96F63 343 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PWWP2AQ96N64 755 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 TRIM56Q9BRZ2 755 aaKnown RBP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 VPS37BQ9H9H4 285 aa17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 MARCH4Q9P2E8 410 aaPredicted RBP17.23■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CACNA1AO00555 2505 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 KIR2DS5A0A0G2JLQ3 304 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 A0A0G2JNG1 304 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 KIR2DS3K7RE56 304 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PRMT5O14744 637 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 RFPL3O75679 317 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 RPS3P23396 243 aaKnown RBP eCLIP17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PMLP29590 882 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ELK3P41970 407 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 FASLGP48023 281 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PLTPP55058 493 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 E2F1Q01094 437 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 SLC7A5Q01650 507 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CRYMQ14894 314 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 KIR2DS5Q14953 304 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 STEAP4Q687X5 459 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CENPUQ71F23 418 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 DET1Q7L5Y6 550 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CILP2Q8IUL8 1156 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ARL14Q8N4G2 192 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CLDN19Q8N6F1 224 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 BEND7Q8N7W2 519 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 AVL9Q8NBF6 648 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 KYQ8NBH2 561 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ADAMTS14Q8WXS8 1223 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 WDR83Q9BRX9 315 aaKnown RBP17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CCM2Q9BSQ5 444 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CARD6Q9BX69 1037 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 P2RY12Q9H244 342 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 FAM114A2Q9NRY5 505 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ACSL5Q9ULC5 683 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 VPS9D1Q9Y2B5 631 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PRSS21Q9Y6M0 314 aa17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ARHGEF17Q96PE2 2063 aaPredicted RBP17.22■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 B4DGG1 531 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 OR1I1O60431 355 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 BANF1O75531 89 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 XRCC1P18887 633 aaPredicted RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PDIA2Q13087 525 aaKnown RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 THOC5Q13769 683 aaKnown RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 NR1D2Q14995 579 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 N4BP2L1Q5TBK1 243 aaPredicted RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 XKR5Q6UX68 686 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ZDHHC24Q6UX98 284 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ZNF438Q7Z4V0 828 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 CACTIN-AS1Q8N1I8 211 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 GABPB2Q8TAK5 448 aaPredicted RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 FBXO25Q8TCJ0 367 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 HM13Q8TCT9 377 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 PLAC1Q9HBJ0 212 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 INTS10Q9NVR2 710 aaKnown RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 SIRPGQ9P1W8 387 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 ZC3H7BQ9UGR2 993 aaKnown RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 DMGDHQ9UI17 866 aaKnown RBP17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 DNAJC16Q9Y2G8 782 aa17.21■□□□□ 0.35
COMMD3-BMI1-201ENST00000417470 NDUFS3O75489 264 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 EML2O95834 649 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FTH1P02794 183 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 MYF5P13349 255 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GPR3P46089 330 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PLOD1Q02809 727 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GUCY2DQ02846 1103 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 RPA4Q13156 261 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 TRADDQ15628 312 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PLA2G4EQ3MJ16 856 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 GUSBP11Q6P575 273 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 UNC5AQ6ZN44 842 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CYS1Q717R9 158 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 CNTN4Q8IWV2 1026 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PNPLA1Q8N8W4 532 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FBXO36Q8NEA4 188 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 WDR48Q8TAF3 677 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 IFI44Q8TCB0 444 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 MAPK15Q8TD08 544 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 PRDM8Q9NQV8 689 aa17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 C20orf96Q9NUD7 363 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-BMI1-201ENST00000417470 ZDHHC18Q9NUE0 388 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms