RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 TEX19Q8NA77 164 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 FAM71BQ8TC56 605 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 BLOC1S5Q8TDH9 187 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 TFB1MQ8WVM0 346 aaKnown RBP6.86□□□□□ -1.31
COPS3-202ENST00000417352 HAUS1Q96CS2 278 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 EID2BQ96D98 161 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 IMP4Q96G21 291 aaKnown RBP6.86□□□□□ -1.31
COPS3-202ENST00000417352 ZDHHC12Q96GR4 267 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 SLC45A3Q96JT2 553 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 C9orf72Q96LT7 481 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 WDR24Q96S15 920 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 TWSG1Q9GZX9 223 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 EPB41L1Q9H4G0 881 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 MAGEE1Q9HCI5 957 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 PDE7BQ9NP56 450 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 KLHL8Q9P2G9 620 aaPredicted RBP6.86□□□□□ -1.31
COPS3-202ENST00000417352 PKP3Q9Y446 797 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 CFAP20Q9Y6A4 193 aaKnown RBP6.86□□□□□ -1.31
COPS3-202ENST00000417352 SLC30A1Q9Y6M5 507 aa6.86□□□□□ -1.31
COPS3-202ENST00000417352 UBA6A0AVT1 1052 aaPredicted RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 PRR19A6NJB7 356 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 DDX3YO15523 660 aaKnown RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 VEGFDO43915 354 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A9O60656 530 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 CST8O60676 142 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 NDST3O95803 873 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 NTRK1P04629 796 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 POLBP06746 335 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 TMEM253P0C7T8 217 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 ZNF28P17035 718 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 BPIP17213 487 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 XRCC1P18887 633 aaPredicted RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A6P19224 532 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 MSH3P20585 1137 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A1P22309 533 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A4P22310 534 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 OAS2P29728 719 aaKnown RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 PBX1P40424 430 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 ARHGAP25P42331 645 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 CLCNKAP51800 687 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 IFI35P80217 286 aaPredicted RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 PDE1BQ01064 536 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 XRCC4Q13426 336 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 KCNAB1Q14722 419 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 NOMO1Q15155 1222 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 ATP13A5Q4VNC0 1218 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 LACTB2Q53H82 288 aaPredicted RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 RNFT1Q5M7Z0 435 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 FNBP1LQ5T0N5 605 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 KLHL35Q6PF15 583 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 TMEM220Q6QAJ8 160 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 GLT6D1Q7Z4J2 308 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 TMC3Q7Z5M5 1100 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 PPP1R3BQ86XI6 285 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 RHOT1Q8IXI2 618 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 PLD5Q8N7P1 536 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 BMPERQ8N8U9 685 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 SIDT2Q8NBJ9 832 aaKnown RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 IPMKQ8NFU5 416 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 BRSK1Q8TDC3 778 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 RSC1A1Q92681 617 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 P3H4Q92791 437 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 LYSMD1Q96S90 227 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 FSD1LQ9BXM9 530 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 SLC25A51Q9H1U9 297 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 EPN3Q9H201 632 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 NHEJ1Q9H9Q4 299 aaPredicted RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A7Q9HAW7 530 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A10Q9HAW8 530 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 UGT1A8Q9HAW9 530 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 GLOD4Q9HC38 313 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 SLC40A1Q9NP59 571 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 IMP3Q9NV31 184 aaKnown RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 DDX56Q9NY93 547 aaKnown RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 ZNF624Q9P2J8 865 aaPredicted RBP6.85□□□□□ -1.31
COPS3-202ENST00000417352 PDP2Q9P2J9 529 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 CROTQ9UKG9 612 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 PADI1Q9ULC6 663 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 SPO11Q9Y5K1 396 aa6.85□□□□□ -1.31
COPS3-202ENST00000417352 GLYATL1P3A0A0U1RQE8 302 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 GPR89AB7ZAQ6 455 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 MKRN2OSH3BPM6 223 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 H7C0C1 242 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 SPAG6O75602 509 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 POP7O75817 140 aaKnown RBP6.84□□□□□ -1.31
COPS3-202ENST00000417352 GPR89BP0CG08 455 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 NFKB1P19838 968 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 NR1D1P20393 614 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 COMTP21964 271 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 PTPN3P26045 913 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 CTNNA2P26232 953 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 SPAM1P38567 509 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 STAT5AP42229 794 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 ATP5OP48047 213 aa6.84□□□□□ -1.31
COPS3-202ENST00000417352 ARCN1P48444 511 aaKnown RBP6.84□□□□□ -1.31
COPS3-202ENST00000417352 MLLT10P55197 1068 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms