RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 DNAJC7Q99615 494 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 CHP1Q99653 195 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 MAP3K3Q99759 626 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 MLPHQ9BV36 600 aaPredicted RBP13.47□□□□□ -0.25
SSB-204ENST00000417292 TDRD1Q9BXT4 1180 aaKnown RBP13.47□□□□□ -0.25
SSB-204ENST00000417292 PACSIN1Q9BY11 444 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 TCFL5Q9UL49 500 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 G3BP2Q9UN86 482 aaKnown RBP13.47□□□□□ -0.25
SSB-204ENST00000417292 SNX7Q9UNH6 387 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 B3GNT3Q9Y2A9 372 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 NTNG1Q9Y2I2 539 aa13.47□□□□□ -0.25
SSB-204ENST00000417292 F5H423 210 aaPredicted RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 MFAP3LO75121 409 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 MTA2O94776 668 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 JCHAINP01591 159 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 MYBL1P10243 752 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 ZNF7P17097 686 aaPredicted RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 IL4RP24394 825 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 VAV2P52735 878 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 ZNF135P52742 658 aaPredicted RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 DSC2Q02487 901 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 ITKQ08881 620 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 ELOAQ14241 798 aaKnown RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 NAA30Q147X3 362 aaPredicted RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 PLEKHS1Q5SXH7 462 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 PRAMEF17Q5VTA0 474 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 SP5Q6BEB4 398 aaPredicted RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 ALG1LQ6GMV1 187 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 MED25Q71SY5 747 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 POLNQ7Z5Q5 900 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 TMEM126BQ8IUX1 230 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 ZNF547Q8IVP9 402 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 MCEMP1Q8IX19 187 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 TMEM102Q8N9M5 508 aaPredicted RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 LPCAT1Q8NF37 534 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 EID2BQ96D98 161 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 NUP85Q9BW27 656 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 POLR1EQ9GZS1 481 aaKnown RBP13.46□□□□□ -0.25
SSB-204ENST00000417292 ZWILCHQ9H900 591 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 TRIM39Q9HCM9 518 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 ABHD10Q9NUJ1 306 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 C5AR2Q9P296 337 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 TRIM10Q9UDY6 481 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 DNPEPQ9ULA0 475 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 WDR37Q9Y2I8 494 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 SCINQ9Y6U3 715 aa13.46□□□□□ -0.25
SSB-204ENST00000417292 H3BRJ5 948 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 MEN1O00255 615 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 LRRTM2O43300 516 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 RNF8O76064 485 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 SLC25A14O95258 325 aaPredicted RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 CYP1A2P05177 515 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 CAPN1P07384 714 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 TPM1P09493 284 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 RAB40ALP0C0E4 278 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 IL1R2P27930 398 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 TUBB4BP68371 445 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 ATP1A4Q13733 1029 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 TUBB2AQ13885 445 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 GPR19Q15760 415 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 DPYSL2Q16555 572 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 ANKRD20A8PQ5CZ79 823 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 AGAP9Q5VTM2 703 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 TXNRD3NBQ6F5E7 133 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 WASH2PQ6VEQ5 465 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 ZC3H18Q86VM9 953 aaKnown RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 RBM12BQ8IXT5 1001 aaKnown RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 UBE2Q2Q8WVN8 375 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 ZNF501Q96CX3 271 aaPredicted RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 CXorf40BQ96DE9 158 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 CSPG4P5Q96PW8 444 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 TUBB2BQ9BVA1 445 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 NLNQ9BYT8 704 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 SPTLC3Q9NUV7 552 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 ZNHIT6Q9NWK9 470 aaKnown RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 PKD2L2Q9NZM6 624 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 NENFQ9UMX5 172 aa13.45□□□□□ -0.26
SSB-204ENST00000417292 COPG1Q9Y678 874 aaKnown RBP13.45□□□□□ -0.26
SSB-204ENST00000417292 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 GPR89AB7ZAQ6 455 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 KMOO15229 486 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 AKR1B10O60218 316 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 MTX2O75431 263 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 KLK3P07288 261 aaPredicted RBP13.44□□□□□ -0.26
SSB-204ENST00000417292 GPR89BP0CG08 455 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 FECHP22830 423 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 CA5AP35218 305 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 ARL4DP49703 201 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 HSD11B2P80365 405 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 NIPAL4Q0D2K0 466 aa13.44□□□□□ -0.26
SSB-204ENST00000417292 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms