RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 DCST1Q5T197 706 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 POTEHQ6S545 545 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.93□□□□□ -0.5
UBR4-205ENST00000417040 RPS27LQ71UM5 84 aaKnown RBP11.93□□□□□ -0.5
UBR4-205ENST00000417040 ADGRG2Q8IZP9 1017 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 CHST4Q8NCG5 386 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 NEK7Q8TDX7 302 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 CORO1BQ9BR76 489 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 CDADC1Q9BWV3 514 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 TVP23BQ9NYZ1 205 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 MLXQ9UH92 298 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 JCADQ9P266 1359 aa11.93□□□□□ -0.5
UBR4-205ENST00000417040 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CES1P23141 567 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TCEA1P23193 301 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 RHBDL3P58872 404 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ILF2Q12905 390 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 TIGD6Q17RP2 521 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 UBAP2Q5T6F2 1119 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 JAZF1Q86VZ6 243 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 FAM129CQ86XR2 697 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ZDHHC18Q9NUE0 388 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 INTS10Q9NVR2 710 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 ARL5AQ9Y689 179 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 A0A0X1KG70 313 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 FOXD2O60548 495 aaPredicted RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 ARPC4P59998 168 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 SEMG2Q02383 582 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 NAE1Q13564 534 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 ERI1Q8IV48 349 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 RBFAQ8N0V3 343 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CADM2Q8N3J6 435 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 PIK3R3Q92569 461 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 UBE2E3Q969T4 207 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 MYO19Q96H55 970 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 PTPN18Q99952 460 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 DHX33Q9H6R0 707 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 OAZ3Q9UMX2 235 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 PEX16Q9Y5Y5 336 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ST14Q9Y5Y6 855 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TBC1D3BA6NDS4 549 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 PRODHO43272 600 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CCNB2O95067 398 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 IL1BP01584 269 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 KIR3DL1P43629 444 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CHRNA4P43681 627 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ACAP2Q15057 778 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TNFAIP8L3Q5GJ75 292 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TNFAIP8L1Q8WVP5 186 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 SLC9A6Q92581 669 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 C2orf49Q9BVC5 232 aaPredicted RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 SLC35F4A4IF30 521 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 E9PAM4 449 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 AP2A1O95782 977 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 GRIA1P42261 906 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 PSEN1P49768 467 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TXNL4AP83876 142 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TARBP2Q15633 366 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 FBXL20Q96IG2 436 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 OR52B2Q96RD2 323 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 COPS8Q99627 209 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 BRINP2Q9C0B6 783 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 KAT8Q9H7Z6 458 aaKnown RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 PRDM8Q9NQV8 689 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 GRIP1Q9Y3R0 1128 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CNTNAP1P78357 1384 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TRBV23OR9-2A0A075B6M9 112 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 NEMP2A6NFY4 417 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CSN2P05814 226 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ARF4P18085 180 aaPredicted RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 HDCP19113 662 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CXCR2P25025 360 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 CYP2C18P33260 490 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 DCDC1P59894 354 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 FUT2Q10981 343 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ZBTB8BQ8NAP8 495 aaPredicted RBP11.92□□□□□ -0.5
UBR4-205ENST00000417040 ZNF563Q8TA94 476 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 ST3GAL5Q9UNP4 418 aa11.92□□□□□ -0.5
UBR4-205ENST00000417040 H3BSH0 61 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 IFNA6P05013 189 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 FGF1P05230 155 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 DBIP07108 87 aaKnown RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 SLC18A2Q05940 514 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 NPTX1Q15818 432 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 ATP6V1C2Q8NEY4 427 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 DCAKDQ8WVC6 231 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 LMAN2LQ9H0V9 348 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.91□□□□□ -0.5
UBR4-205ENST00000417040 A0A088AWK7 358 aa11.91□□□□□ -0.5
UBR4-205ENST00000417040 CHST10O43529 356 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms