RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SPERTQ8NA61 448 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 PAPD5Q8NDF8 572 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ANKK1Q8NFD2 765 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR6B3Q8NGW1 331 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR6F1Q8NGZ6 308 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ANKRD49Q8WVL7 239 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF300Q96RE9 604 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 MRPL45Q9BRJ2 306 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 RPRD1BQ9NQG5 326 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 C14orf119Q9NWQ9 140 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 RABL2BQ9UNT1 228 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 A0A087X1B8 175 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 PRMT5O14744 637 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 HBP1O60381 514 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 C1RP00736 705 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 STAG3L1P0CL83 205 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 GRK3P35626 688 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ACADSBP45954 432 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 KCNC1P48547 511 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CSRP3P50461 194 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 MXD4Q14582 209 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF181Q2M3W8 571 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ARHGAP36Q6ZRI8 547 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 LDB1Q86U70 411 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR52K2Q8NGK3 314 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SLC35F5Q8WV83 523 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CELF6Q96J87 481 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 NSUN5Q96P11 429 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZIC5Q96T25 663 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CRNNQ9UBG3 495 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CACNG4Q9UBN1 327 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 FBXO5Q9UKT4 447 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SPEF1Q9Y4P9 236 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SCN4AP35499 1836 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 MEN1O00255 615 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZW10O43264 779 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 PTTG1O95997 202 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 LTA4HP09960 611 aaKnown RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 LBPP18428 481 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 S100A5P33763 92 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ATP4BP51164 291 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ISL1P61371 349 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 UFM1P61960 85 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 TOP3AQ13472 1001 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 RAPSNQ13702 412 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 LAPTM4AQ15012 233 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CDK10Q15131 360 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 PLA2G4EQ3MJ16 856 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 GPR158Q5T848 1215 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 NXNL2Q5VZ03 156 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 BLOC1S3Q6QNY0 202 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 PLPPR4Q7Z2D5 763 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 DTWD1Q8N5C7 304 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 TINF2Q9BSI4 451 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 BEX2Q9BXY8 128 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CCDC177Q9NQR7 707 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ENTPD7Q9NQZ7 604 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 FLRT1Q9NZU1 646 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 LIMD1Q9UGP4 676 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SNX6Q9UNH7 406 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 MAU2Q9Y6X3 613 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SHROOM3Q8TF72 1996 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 M0QYT0 321 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 TFECO14948 347 aaPredicted RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 C22orf31O95567 290 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 GOT2P00505 430 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 MT-ND2P03891 347 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 LCKP06239 509 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 NOS2P35228 1153 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 TPRG1LQ5T0D9 272 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 NAPEPLDQ6IQ20 393 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 ENPP6Q6UWR7 440 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF540Q8NDQ6 660 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 OPTCQ9UBM4 332 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF638Q14966 1978 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 MICAL3Q7RTP6 2002 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 LOC100506127A0A0U1RQW1 187 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 A0A1W2PP18 115 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 AGAP5A6NIR3 686 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 SAGE2PA6NJ88 616 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 BCKDKO14874 412 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 DNTTP04053 509 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 RAP2AP10114 183 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 CXCR3P49682 368 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 CDK5R2Q13319 367 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 SMN1Q16637 294 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 KCTD11Q693B1 232 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 TTC39CQ8N584 583 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 IL17RDQ8NFM7 739 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 PARK7Q99497 189 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 PRRG3Q9BZD7 231 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 DPEP3Q9H4B8 488 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 KAT8Q9H7Z6 458 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 POLG2Q9UHN1 485 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 WBP11Q9Y2W2 641 aaKnown RBP14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 PCDHGA10Q9Y5H3 936 aa14.54□□□□□ -0.08
NCKIPSD-204ENST00000416649 PDE4DIPQ5VU43 2346 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms