RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CCL14Q16627 93 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 C6orf136Q5SQH8 315 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 XAF1Q6GPH4 301 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 GPRIN3Q6ZVF9 776 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 OR13F1Q8NGS4 319 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 PROKR1Q8TCW9 393 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 SLC35B4Q969S0 331 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 NRBF2Q96F24 287 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 AURKBQ96GD4 344 aaPredicted RBP9.68□□□□□ -0.86
CD44-206ENST00000415148 RPRD1AQ96P16 312 aaPredicted RBP9.68□□□□□ -0.86
CD44-206ENST00000415148 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 LHPPQ9H008 270 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 NTN4Q9HB63 628 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 MAGEE1Q9HCI5 957 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.68□□□□□ -0.86
CD44-206ENST00000415148 COMMD8Q9NX08 183 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 ZNF225Q9UK10 706 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 PCDHGA11Q9Y5H2 935 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 DGKBQ9Y6T7 804 aa9.68□□□□□ -0.86
CD44-206ENST00000415148 TRIM43BA6NCK2 446 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 IQCA1LA6NCM1 817 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 C2orf81A6NN90 581 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 CDC7O00311 574 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 MUSKO15146 869 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SYNCRIPO60506 623 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 SULT1C4O75897 302 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 RAP2AP10114 183 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PCNAP12004 261 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PKMP14618 531 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 CD52P31358 61 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ACVRL1P37023 503 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 CASP2P42575 452 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 TTPAP49638 278 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ARSFP54793 590 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 OR4D2P58180 307 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 IL2P60568 153 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 AQP6Q13520 282 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SELPLGQ14242 412 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 NR1D2Q14995 579 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 RBBP7Q16576 425 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ATP6AP1LQ52LC2 224 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 FAM98BQ52LJ0 330 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 EGFLAMQ63HQ2 1017 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 C16orf87Q6PH81 154 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 NCCRP1Q6ZVX7 275 aaPredicted RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 RALGPS2Q86X27 583 aaPredicted RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 GPSM1Q86YR5 675 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 DCBLD1Q8N8Z6 715 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 POP5Q969H6 163 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 RNF145Q96MT1 663 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GPR21Q99679 349 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ADAM2Q99965 735 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 MAGEH1Q9H213 219 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GORASP2Q9H8Y8 452 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 CARS2Q9HA77 564 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 TLR8Q9NR97 1041 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 CPA4Q9UI42 421 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 UTS2RQ9UKP6 389 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 FAM50BQ9Y247 325 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PCDHB5Q9Y5E4 795 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ST14Q9Y5Y6 855 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SLC30A1Q9Y6M5 507 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 C1orf232A0A0U1RR37 186 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 C16orf96A6NNT2 1141 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 UPK1AO00322 258 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 BTN3A1O00481 513 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 E2F3O00716 465 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 XYLBO75191 536 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 KATNA1O75449 491 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GMNNO75496 209 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 RSL1D1O76021 490 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 SEC14L2O76054 403 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ALDH2P05091 517 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ANXA6P08133 673 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 OR4Q2P0C623 313 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 HOXB6P17509 224 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 IL12AP29459 219 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 IDUAP35475 653 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PHEXP78562 749 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PPP1R8Q12972 351 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 ITGADQ13349 1161 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PWP1Q13610 501 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 DAG1Q14118 895 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SPIDRQ14159 915 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SPCS2Q15005 226 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 DDR2Q16832 855 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SMU1Q2TAY7 513 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GNASQ5JWF2 1037 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 BROXQ5VW32 411 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 TTC23Q5W5X9 447 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 UGT3A1Q6NUS8 523 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 DLEU7Q6UYE1 221 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 IGFN1Q86VF2 1251 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 HS3ST5Q8IZT8 346 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 OR8J3Q8NGG0 315 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 OR52E4Q8NGH9 312 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms