RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 ASB2Q96Q27 587 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 HGH1Q9BTY7 390 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 P2RY12Q9H244 342 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 SMURF2Q9HAU4 748 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 ANAPC2Q9UJX6 822 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 GABRQQ9UN88 632 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 PIKFYVEQ9Y2I7 2098 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 CCDC154A6NI56 674 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 M0QZ92 97 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 SEC14L2O76054 403 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 AKR1A1P14550 325 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 IL7RP16871 459 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 ATF6P18850 670 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 IL10P22301 178 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 FSHRP23945 695 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TPP2P29144 1249 aaPredicted RBP9.74□□□□□ -0.85
SS18-203ENST00000415083 GATMP50440 423 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 HLCSP50747 726 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 PSMD7P51665 324 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 SH3BGRP55822 239 aaPredicted RBP9.74□□□□□ -0.85
SS18-203ENST00000415083 EEFSECP57772 596 aaKnown RBP9.74□□□□□ -0.85
SS18-203ENST00000415083 PHC1P78364 1004 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 C16orf72Q14CZ0 275 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 NEDD8Q15843 81 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 ZXDCQ2QGD7 858 aaPredicted RBP9.74□□□□□ -0.85
SS18-203ENST00000415083 ANKS6Q68DC2 871 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TAS1R1Q7RTX1 841 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TMEM173Q86WV6 379 aaPredicted RBP9.74□□□□□ -0.85
SS18-203ENST00000415083 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TTC30BQ8N4P2 665 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 KLHL23Q8NBE8 558 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 MIPOL1Q8TD10 442 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TMBIM1Q969X1 311 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 RHBDF1Q96CC6 855 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 SYT17Q9BSW7 474 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 LHPPQ9H008 270 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 HEBP1Q9NRV9 189 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 FAIMQ9NVQ4 179 aa9.74□□□□□ -0.85
SS18-203ENST00000415083 TSR3Q9UJK0 312 aaKnown RBP9.74□□□□□ -0.85
SS18-203ENST00000415083 FAM234BA2RU67 622 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ZSCAN9O15535 394 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 GJB5O95377 273 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ENO2P09104 434 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 CNPP09543 421 aaKnown RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 CASP2P42575 452 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 GRSF1Q12849 480 aaKnown RBP eCLIP9.73□□□□□ -0.85
SS18-203ENST00000415083 TRAF3Q13114 568 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TGFBIQ15582 683 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 GTDC1Q4AE62 458 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 OTUD3Q5T2D3 398 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 GLYATQ6IB77 296 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ABRAXAS1Q6UWZ7 409 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 SLC16A12Q6ZSM3 486 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 DHRSXQ8N5I4 330 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 VPS50Q96JG6 964 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TNKS2Q9H2K2 1166 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 GID8Q9NWU2 228 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 PRG3Q9Y2Y8 225 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ZFP37Q9Y6Q3 630 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 CDH23Q9H251 3354 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TNPO2O14787 897 aaKnown RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 ASGR1P07306 291 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 C7P10643 843 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 AGXTP21549 392 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 GGT5P36269 586 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 BMXP51813 675 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ARSFP54793 590 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TRAF2Q12933 501 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TCTN1Q2MV58 587 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 C10orf120Q5SQS8 335 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 HID1Q8IV36 788 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 LGI2Q8N0V4 545 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 LINGO1Q96FE5 620 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 RNF145Q96MT1 663 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 BARD1Q99728 777 aaKnown RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 ALOXE3Q9BYJ1 711 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 CD320Q9NPF0 282 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 VNN3Q9NY84 501 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 HACD3Q9P035 362 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 PCDHGA8Q9Y5G5 932 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 C5orf42Q9H799 3197 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TET1Q8NFU7 2136 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ADAM12O43184 909 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 TBC1D4O60343 1298 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 SYNCRIPO60506 623 aaKnown RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 FUCA1P04066 466 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 HOXB9P17482 250 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 GGT1P19440 569 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 GZMMP51124 257 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 ARF5P84085 180 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 NFATC3Q12968 1075 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 GRIK2Q13002 908 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 PTGR1Q14914 329 aa9.73□□□□□ -0.85
SS18-203ENST00000415083 HABP4Q5JVS0 413 aaKnown RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 ACBD5Q5T8D3 534 aaPredicted RBP9.73□□□□□ -0.85
SS18-203ENST00000415083 ATP6V0D2Q8N8Y2 350 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms