RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 NT5DC3Q86UY8 548 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 SLC38A9Q8NBW4 561 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 ZNF501Q96CX3 271 aaPredicted RBP11.9□□□□□ -0.5
LIMS2-210ENST00000413578 LRFN5Q96NI6 719 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 OLFM3Q96PB7 478 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 CD180Q99467 661 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 TUBB2BQ9BVA1 445 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 CEP41Q9BYV8 373 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 GPR63Q9BZJ6 419 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 ING2Q9H160 280 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 SLC25A51Q9H1U9 297 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 IL26Q9NPH9 171 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 LATS2Q9NRM7 1088 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 FARSAQ9Y285 508 aaKnown RBP11.9□□□□□ -0.5
LIMS2-210ENST00000413578 PCDHGB7Q9Y5F8 929 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 OR5K3A6NET4 321 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 WIPF3A6NGB9 483 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 TLCD2A6NGC4 264 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 ARGFXA6NJG6 315 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-210ENST00000413578 CPNE3O75131 537 aaKnown RBP11.89□□□□□ -0.51
LIMS2-210ENST00000413578 NDST3O95803 873 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 SLC4A1P02730 911 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 SERPING1P05155 500 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 VCLP18206 1134 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 HMGCLP35914 325 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 PTGIRP43119 386 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 GPS2Q13227 327 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 PRR30Q53SZ7 412 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-210ENST00000413578 KLHL35Q6PF15 583 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 VSIG1Q86XK7 387 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 TRAPPC5Q8IUR0 188 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 TTC30BQ8N4P2 665 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 SPATA22Q8NHS9 363 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-210ENST00000413578 SRPK1Q96SB4 655 aaKnown RBP11.89□□□□□ -0.51
LIMS2-210ENST00000413578 TRIM10Q9UDY6 481 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 CENPEQ02224 2701 aa11.89□□□□□ -0.51
LIMS2-210ENST00000413578 SMTNL1A8MU46 457 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 GAPDHSO14556 408 aaPredicted RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 GPR39O43194 453 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 SCRG1O75711 98 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 MT-CYBP00156 380 aaPredicted RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 CAPN1P07384 714 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 RORAP35398 523 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 HALP42357 657 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 CCL11P51671 97 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 HSD11B2P80365 405 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 CHRNA6Q15825 494 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 DNTTIP2Q5QJE6 756 aaKnown RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 LCN10Q6JVE6 187 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 JMJD6Q6NYC1 403 aaPredicted RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 AMZ2Q86W34 360 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 CARFQ8N187 725 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 RBMXL3Q8N7X1 1067 aaKnown RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 RASGEF1AQ8N9B8 481 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 DDHD1Q8NEL9 900 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 OR8K5Q8NH50 307 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 BRSK1Q8TDC3 778 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 AGAP3Q96P47 875 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 CHST8Q9H2A9 424 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 GLOD4Q9HC38 313 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 UVRAGQ9P2Y5 699 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 BTRCQ9Y297 605 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 ZNF451Q9Y4E5 1061 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 DNMT3AQ9Y6K1 912 aaPredicted RBP11.88□□□□□ -0.51
LIMS2-210ENST00000413578 ABCA12Q86UK0 2595 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 MED13Q9UHV7 2174 aa11.88□□□□□ -0.51
LIMS2-210ENST00000413578 ESPL1Q14674 2120 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 LOC285095A0A1B0GVY8 99 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 SSU72P8A0A1W2PR75 194 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 POP7O75817 140 aaKnown RBP11.87□□□□□ -0.51
LIMS2-210ENST00000413578 ZBTB11O95625 1053 aaPredicted RBP11.87□□□□□ -0.51
LIMS2-210ENST00000413578 DDAH2O95865 285 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 RAB40ALP0C0E4 278 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 MTHFD1P11586 935 aaKnown RBP11.87□□□□□ -0.51
LIMS2-210ENST00000413578 CD68P34810 354 aaPredicted RBP11.87□□□□□ -0.51
LIMS2-210ENST00000413578 ZBED6P86452 979 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 AP1B1Q10567 949 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
LIMS2-210ENST00000413578 GTF2H3Q13889 308 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 NFE2L1Q14494 772 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 IQCB1Q15051 598 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 GPR19Q15760 415 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PCSK7Q16549 785 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 TEX44Q53QW1 395 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 ZNF789Q5FWF6 425 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PLEKHS1Q5SXH7 462 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PRAMEF17Q5VTA0 474 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 SLC6A19Q695T7 634 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 KDELC1Q6UW63 502 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms