RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 FAM199XQ6PEV8 388 aaPredicted RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 ZNF517Q6ZMY9 492 aaPredicted RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 SLC26A9Q7LBE3 791 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 CDH24Q86UP0 819 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 FJX1Q86VR8 437 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 PPP1R3BQ86XI6 285 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 ZSWIM9Q86XI8 627 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 CAMK1DQ8IU85 385 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 PASD1Q8IV76 773 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 CNPY4Q8N129 248 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 NXPE1Q8N323 547 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 ST6GALNAC3Q8NDV1 305 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 SHC3Q92529 594 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 ALG3Q92685 438 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 TLCD1Q96CP7 247 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 NUS1Q96E22 293 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 C9orf72Q96LT7 481 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 ZNF641Q96N77 438 aaPredicted RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 OR2M4Q96R27 311 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 TBCBQ99426 244 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 ERP44Q9BS26 406 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 TEX101Q9BY14 249 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 BRD8Q9H0E9 1235 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 CENPHQ9H3R5 247 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 RABEP2Q9H5N1 569 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 SARS2Q9NP81 518 aaKnown RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 UBE2TQ9NPD8 197 aaPredicted RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 ACP6Q9NPH0 428 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 PPARGC1AQ9UBK2 798 aaKnown RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 MTRF1LQ9UGC7 380 aaKnown RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 NOCTQ9UK39 431 aaKnown RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 FARSAQ9Y285 508 aaKnown RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 NTNG1Q9Y2I2 539 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 KLF2Q9Y5W3 355 aaPredicted RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 STAB1Q9NY15 2570 aa6.84□□□□□ -1.31
LSM8-202ENST00000411938 MAP1AP78559 2803 aaPredicted RBP6.84□□□□□ -1.31
LSM8-202ENST00000411938 MN1Q10571 1320 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 ANKRD65E5RJM6 399 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 E7EVH7 732 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 FOXN3O00409 490 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 PRICKLE3O43900 615 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 TIAF1O95411 115 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 EML2O95834 649 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 ERBB2P04626 1255 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 CYP1A2P05177 515 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 FGF5P12034 268 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 GZMAP12544 262 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 CD1EP15812 388 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 RHOQP17081 205 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 BPIP17213 487 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 HTR1EP28566 365 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 SSTR2P30874 369 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 FLT3P36888 993 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 USP8P40818 1118 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 MARCKSL1P49006 195 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 FNTAP49354 379 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 EPHA4P54764 986 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 DRG2P55039 364 aaKnown RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 SNX16P57768 344 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 CDK3Q00526 305 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 FMO1Q01740 532 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 GCNT1Q02742 428 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 IFFO1Q0D2I5 559 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 GRM3Q14832 879 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 CYP1B1Q16678 543 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM8-202ENST00000411938 INO80DQ53TQ3 878 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 VWA5B1Q5TIE3 1220 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 AFMIDQ63HM1 303 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 DENND2CQ68D51 928 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 ZDHHC24Q6UX98 284 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 MARK2Q7KZI7 788 aaKnown RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 NOP9Q86U38 636 aaKnown RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 FAM131BQ86XD5 332 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 PARP9Q8IXQ6 854 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 FAM71AQ8IYT1 594 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 WDTC1Q8N5D0 677 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 GLIS1Q8NBF1 620 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 ZNF653Q96CK0 615 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 HDAC11Q96DB2 347 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 PGAP3Q96FM1 320 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 KREMEN1Q96MU8 473 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 TGM7Q96PF1 710 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 CCT8L2Q96SF2 557 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 SMAD5Q99717 465 aaKnown RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 BARD1Q99728 777 aaKnown RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 TBC1D10AQ9BXI6 508 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 TRIM8Q9BZR9 551 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 TRIM31Q9BZY9 425 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 STMN4Q9H169 189 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 EPB41L4BQ9H329 900 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 EPB41L1Q9H4G0 881 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 ACTR5Q9H9F9 607 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 AKIRIN1Q9H9L7 192 aaPredicted RBP6.83□□□□□ -1.32
LSM8-202ENST00000411938 CHST11Q9NPF2 352 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 GRHL1Q9NZI5 618 aa6.83□□□□□ -1.32
LSM8-202ENST00000411938 C5AR2Q9P296 337 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms