RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TICAM2Q86XR7 235 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 OR8H2Q8N162 312 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 WDTC1Q8N5D0 677 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CSNK2A3Q8NEV1 391 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 THAP6Q8TBB0 222 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM216AQ8WUB2 273 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 WBP1Q96G27 269 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SPATA17Q96L03 361 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SMC6Q96SB8 1091 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 BAG1Q99933 345 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AP1M1Q9BXS5 423 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PANK2Q9BZ23 570 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 USP44Q9H0E7 712 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM234AQ9H0X4 552 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PLK3Q9H4B4 646 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PDZD7Q9H5P4 517 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SCPEP1Q9HB40 452 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PLAC1Q9HBJ0 212 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZCCHC17Q9NP64 241 aaKnown RBP2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HINT3Q9NQE9 182 aaKnown RBP2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ARHGEF38Q9NXL2 777 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CLIC5Q9NZA1 410 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 OR14J1Q9UGF5 321 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DBNLQ9UJU6 430 aaKnown RBP2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MYO6Q9UM54 1294 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ADAM18Q9Y3Q7 739 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CMAHPQ9Y471 501 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NFE2L3Q9Y4A8 694 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CEPT1Q9Y6K0 416 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 STON1Q9Y6Q2 735 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MON2Q7Z3U7 1717 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 UNC80Q8N2C7 3258 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MYO3BQ8WXR4 1341 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HTTP42858 3142 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CENPFP49454 3210 aa2.61□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EIF4E1BA6NMX2 242 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PRSS47A8MTI9 375 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CTDSP2O14595 271 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CLGNO14967 610 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PPIP5K2O43314 1243 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HTATSF1O43719 755 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KRT86O43790 486 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PLOD3O60568 738 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DKC1O60832 514 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KCNJ13O60928 360 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MITFO75030 526 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TBCAO75347 108 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TPPPO94811 219 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 VNN2O95498 520 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GH2P01242 217 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 APOA4P06727 396 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FGF2P09038 288 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PRF1P14222 555 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DAOP14920 347 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 IL7RP16871 459 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ITGAXP20702 1163 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EEF1B2P24534 225 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MT3P25713 68 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HOXD10P28358 340 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ICAM3P32942 547 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SHMT1P34896 483 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CAPZA2P47755 286 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CLCNKAP51800 687 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PNLIPRP2P54317 469 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 P2RX3P56373 397 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SELENOVP59797 346 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SEC61BP60468 96 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MRPS5P82675 430 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EGR4Q05215 589 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GRSF1Q12849 480 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KRT81Q14533 505 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RABEP1Q15276 862 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TMEM266Q2M3C6 531 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 COL28A1Q2UY09 1125 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ASPRV1Q53RT3 343 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RARS2Q5T160 578 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZDHHC20Q5W0Z9 365 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KRT79Q5XKE5 535 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF790Q6PG37 636 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KIF6Q6ZMV9 814 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PQLC2Q6ZP29 291 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ENOSF1Q7L5Y1 443 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ARMC9Q7Z3E5 817 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CCDC190Q86UF4 302 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SLC35F3Q8IY50 421 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NME8Q8N427 588 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AADATQ8N5Z0 425 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SYT2Q8N9I0 419 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ENGASEQ8NFI3 743 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TRPC4APQ8TEL6 797 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CNDP2Q96KP4 475 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DACH2Q96NX9 599 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TESK2Q96S53 571 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NTPCRQ9BSD7 190 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SEZ6LQ9BYH1 1024 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RTN4RQ9BZR6 473 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PNNQ9H307 717 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EPB41L5Q9HCM4 733 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms