RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CCDC112Q8NEF3 446 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 SNRNP27Q8WVK2 155 aaKnown RBP17.38■□□□□ 0.37
LSM5-204ENST00000409909 C1orf54Q8WWF1 131 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 TAAR9Q96RI9 348 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 UBL7Q96S82 380 aaPredicted RBP17.38■□□□□ 0.37
LSM5-204ENST00000409909 B3GNT4Q9C0J1 378 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 FAM96AQ9H5X1 160 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 LRRC40Q9H9A6 602 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 LZTFL1Q9NQ48 299 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 PIH1D1Q9NWS0 290 aaKnown RBP17.38■□□□□ 0.37
LSM5-204ENST00000409909 DNMT3AQ9Y6K1 912 aaPredicted RBP17.38■□□□□ 0.37
LSM5-204ENST00000409909 PIEZO2Q9H5I5 2752 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 SDK2Q58EX2 2172 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 TEX51A0A1B0GUA7 166 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 AP2A1O95782 977 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 LIPCP11150 499 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 TYRP1P17643 537 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 CCZ1BP86790 482 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 CCZ1P86791 482 aaPredicted RBP17.37■□□□□ 0.37
LSM5-204ENST00000409909 GPR18Q14330 331 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 NFE2L1Q14494 772 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 RPS6KA1Q15418 735 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 P3H1Q32P28 736 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 PCSK4Q6UW60 755 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 XKR5Q6UX68 686 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 ZNF662Q6ZS27 426 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 DTX1Q86Y01 620 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 UBE2Q2Q8WVN8 375 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 ART4Q93070 314 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 DNAJC1Q96KC8 554 aaKnown RBP17.37■□□□□ 0.37
LSM5-204ENST00000409909 CCNL2Q96S94 520 aaPredicted RBP17.37■□□□□ 0.37
LSM5-204ENST00000409909 C19orf43Q9BQ61 176 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 EPB41L1Q9H4G0 881 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 POT1Q9NUX5 634 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 PSMD13Q9UNM6 376 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 PCDHGA3Q9Y5H0 932 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 B3GALT1Q9Y5Z6 326 aa17.37■□□□□ 0.37
LSM5-204ENST00000409909 FASNP49327 2511 aaKnown RBP17.37■□□□□ 0.37
LSM5-204ENST00000409909 EFCAB7A8K855 629 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 B4E171 279 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 K7ENP7 123 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 UBXN7O94888 489 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 CCDC175P0C221 793 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 PBLDP30039 288 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 STIP1P31948 543 aaKnown RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 TSPAN7P41732 249 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 CDKN1CP49918 316 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 GFERP55789 205 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 SNX1Q13596 522 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 SIX1Q15475 284 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 RPE65Q16518 533 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 LONRF2Q1L5Z9 754 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 TMEM164Q5U3C3 297 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 METRNLQ641Q3 311 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 INO80CQ6PI98 192 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 CCDC81Q6ZN84 652 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 PRUNE1Q86TP1 453 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 FAM129CQ86XR2 697 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 NXPE1Q8N323 547 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 LRRC45Q96CN5 670 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 CXorf40BQ96DE9 158 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 ZNF514Q96K75 400 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 FRMD8P1Q9BZ68 369 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 NLE1Q9NVX2 485 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 WDR70Q9NW82 654 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 SLC39A1Q9NY26 324 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 KLHL3Q9UH77 587 aa17.36■□□□□ 0.37
LSM5-204ENST00000409909 MN1Q10571 1320 aaPredicted RBP17.36■□□□□ 0.37
LSM5-204ENST00000409909 MGAT4DA6NG13 374 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.35■□□□□ 0.37
LSM5-204ENST00000409909 ATXN7O15265 892 aaPredicted RBP17.35■□□□□ 0.37
LSM5-204ENST00000409909 PSMD3O43242 534 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 C9P02748 559 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 PRSS56P0CW18 603 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 ETS1P14921 441 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 CD82P27701 267 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 MC4RP32245 332 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 HADHAP40939 763 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 POU6F1Q14863 301 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 BCL7AQ4VC05 210 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 SNX20Q7Z614 316 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 PLXDC1Q8IUK5 500 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 RBM12BQ8IXT5 1001 aaKnown RBP17.35■□□□□ 0.37
LSM5-204ENST00000409909 GPR150Q8NGU9 434 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 OR2L2Q8NH16 312 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 DDA1Q9BW61 102 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 ETNK1Q9HBU6 452 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 CRLS1Q9UJA2 301 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 ZNF148Q9UQR1 794 aa17.35■□□□□ 0.37
LSM5-204ENST00000409909 TRBV5-4A0A0C4DH59 114 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 MROH6A6NGR9 719 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 H7C0S8 307 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 IFNB1P01574 187 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 AMD1P17707 334 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 ITGALP20701 1170 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 HALP42357 657 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 LEPRP48357 1165 aaKnown RBP17.34■□□□□ 0.37
LSM5-204ENST00000409909 MC2RQ01718 297 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 SEPT6Q14141 434 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms